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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008496
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.109s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v2139510.1
n.a. PREDICTED: protein RTE1-HOMOLOG-like [Cicer arietinum] gi|502161225|ref|XP_004512083.1| chr1 25676884 25678209 +
3 domain predictions
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Lj2g3v1728800.1
n.a. PREDICTED: protein RTE1-HOMOLOG-like [Cicer arietinum] gi|502161225|ref|XP_004512083.1| chr2 26543622 26545440 -
3 domain predictions
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Lj5g3v0391630.1
n.a. PREDICTED: protein REVERSION-TO-ETHYLENE SENSITIVITY1-like [Cicer arietinum] gi|502125351|ref|XP_004498900.1| chr5 3703563 3706220 -
3 domain predictions
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LotjaGi2g1v0385900.1
n.a. Protein REVERSION-TO-ETHYLENE SENSITIVITY1; TAIR: AT3G51040.1 RTE1-homolog; Swiss-Prot: sp|Q9SD42|RTH_ARATH Protein RTE1-HOMOLOG; TrEMBL-Plants: tr|I3T8P7|I3T8P7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0385900 LjG1.1_chr2 88178952 88181324 -
3 domain predictions
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LotjaGi2g1v0385900.2
n.a. Protein REVERSION-TO-ETHYLENE SENSITIVITY1; TAIR: AT3G51040.1 RTE1-homolog; Swiss-Prot: sp|Q9SD42|RTH_ARATH Protein RTE1-HOMOLOG; TrEMBL-Plants: tr|I3T8P7|I3T8P7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0385900 LjG1.1_chr2 88179650 88181066 -
3 domain predictions
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LotjaGi5g1v0041800.1
n.a. Protein REVERSION-TO-ETHYLENE SENSITIVITY1; TAIR: AT2G26070.1 protein REVERSION-TO-ETHYLENE SENSITIVITY-like protein (DUF778); Swiss-Prot: sp|F4ITL6|RTE1_ARATH Protein REVERSION-TO-ETHYLENE SENSITIVITY1; TrEMBL-Plants: tr|I3S7V1|I3S7V1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0041800 LjG1.1_chr5 6983634 6987017 -
3 domain predictions
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LotjaGi5g1v0041800.2
n.a. Protein REVERSION-TO-ETHYLENE SENSITIVITY1; TAIR: AT2G26070.1 protein REVERSION-TO-ETHYLENE SENSITIVITY-like protein (DUF778); Swiss-Prot: sp|F4ITL6|RTE1_ARATH Protein REVERSION-TO-ETHYLENE SENSITIVITY1; TrEMBL-Plants: tr|I3S7V1|I3S7V1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0041800 LjG1.1_chr5 6984162 6985826 -
3 domain predictions
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