Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008590
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.665s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0102939.1
n.a. PREDICTED: transmembrane protein 230-like [Cicer arietinum] gi|502150370|ref|XP_004507921.1| chr0 43845287 43845653 +
2 domain predictions
 –
Lj4g3v2140160.1
n.a. PREDICTED: transmembrane protein 230-like [Cicer arietinum] gi|502150370|ref|XP_004507921.1| chr4 29634203 29634570 +
2 domain predictions
 –
Lj6g3v1970180.1
n.a. PREDICTED: UPF0414 transmembrane protein C20orf30 homolog [Glycine max] gi|356555453|ref|XP_003546046.1| chr6 22832263 22835894 +
2 domain predictions
 –
LotjaGi2g1v0054600_LC.1
n.a. Transmembrane-like protein; TAIR: AT1G40087.1 Plant transposase (Ptta/En/Spm family); Swiss-Prot: sp|Q5ZLH4|TM230_CHICK Transmembrane protein 230; TrEMBL-Plants: tr|B1B5X5|B1B5X5_TOBAC 6b-interacting protein 2; Found in the gene: LotjaGi2g1v0054600_LC LjG1.1_chr2 10829886 10834591 -
2 domain predictions
 –
LotjaGi3g1v0024900.1
n.a. Transmembrane-like protein; TAIR: AT3G29170.1 transmembrane protein (DUF872); Swiss-Prot: sp|Q5ZLH4|TM230_CHICK Transmembrane protein 230; TrEMBL-Plants: tr|V7CJ15|V7CJ15_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0024900 LjG1.1_chr3 2731778 2734476 +
2 domain predictions
 –
LotjaGi3g1v0024900.2
n.a. Transmembrane-like protein; TAIR: AT3G29170.1 transmembrane protein (DUF872); Swiss-Prot: sp|Q5ZLH4|TM230_CHICK Transmembrane protein 230; TrEMBL-Plants: tr|V7CJ15|V7CJ15_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0024900 LjG1.1_chr3 2731783 2734476 +
2 domain predictions
 –
LotjaGi3g1v0024900.3
n.a. Transmembrane-like protein; TAIR: AT3G29170.1 transmembrane protein (DUF872); Swiss-Prot: sp|Q5ZLH4|TM230_CHICK Transmembrane protein 230; TrEMBL-Plants: tr|V7CJ15|V7CJ15_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0024900 LjG1.1_chr3 2731810 2734270 +
2 domain predictions
 –
LotjaGi3g1v0024900.4
n.a. Transmembrane-like protein; TAIR: AT3G29170.1 transmembrane protein (DUF872); Swiss-Prot: sp|Q5ZLH4|TM230_CHICK Transmembrane protein 230; TrEMBL-Plants: tr|V7CJ15|V7CJ15_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0024900 LjG1.1_chr3 2732981 2734119 +
2 domain predictions
 –
LotjaGi3g1v0203200_LC.1
n.a. Transmembrane-like protein; TAIR: AT3G29170.1 transmembrane protein (DUF872); Swiss-Prot: sp|Q5ZLH4|TM230_CHICK Transmembrane protein 230; TrEMBL-Plants: tr|V7CJ15|V7CJ15_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0203200_LC LjG1.1_chr3 29653282 29657311 -
2 domain predictions
 –
LotjaGi4g1v0308300.1
n.a. Transmembrane-like protein; TAIR: AT4G29850.1 transmembrane protein (DUF872); Swiss-Prot: sp|Q8CIB6|TM230_MOUSE Transmembrane protein 230; TrEMBL-Plants: tr|G7JT77|G7JT77_MEDTR Transmembrane-like protein; Found in the gene: LotjaGi4g1v0308300 LjG1.1_chr4 68417812 68418403 +
2 domain predictions
 –
LotjaGi6g1v0233100.1
n.a. Transmembrane-like protein; TAIR: AT4G29850.1 transmembrane protein (DUF872); Swiss-Prot: sp|Q5E975|TM230_BOVIN Transmembrane protein 230; TrEMBL-Plants: tr|A0A1J7GVS5|A0A1J7GVS5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0233100 LjG1.1_chr6 54236351 54239190 -
2 domain predictions
 –
LotjaGi6g1v0318600.1
n.a. Photosystem II reaction center protein H; TAIR: AT3G29170.1 transmembrane protein (DUF872); Swiss-Prot: sp|Q5ZLH4|TM230_CHICK Transmembrane protein 230; TrEMBL-Plants: tr|I3T1S3|I3T1S3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0318600 LjG1.1_chr6 63568436 63572796 +
2 domain predictions
 –
LotjaGi6g1v0318600.2
n.a. Photosystem II reaction center protein H; TAIR: AT3G29170.1 transmembrane protein (DUF872); Swiss-Prot: sp|Q5ZLH4|TM230_CHICK Transmembrane protein 230; TrEMBL-Plants: tr|I3T1S3|I3T1S3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0318600 LjG1.1_chr6 63570256 63571925 +
2 domain predictions
 –