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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008672
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 3 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.406s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v0002130.1
n.a. PREDICTED: intracellular protein transport protein USO1-like isoform X2 [Cicer arietinum] gi|502126589|ref|XP_004499365.1| chr4 122876 135981 +
3 domain predictions
1 GO term
Lj4g3v0002130.2
n.a. PREDICTED: intracellular protein transport protein USO1-like isoform X2 [Cicer arietinum] gi|502126589|ref|XP_004499365.1| chr4 122876 138290 +
3 domain predictions
1 GO term
LotjaGi4g1v0001500.1
n.a. Mitotic spindle assembly checkpoint protein MAD1; TAIR: AT5G49880.1 mitotic checkpoint family protein; Swiss-Prot: sp|Q9LTY1|MAD1_ARATH Mitotic spindle checkpoint protein MAD1; TrEMBL-Plants: tr|A0A0B2P2M0|A0A0B2P2M0_GLYSO Mitotic spindle assembly checkpoint protein MAD1; Found in the gene: LotjaGi4g1v0001500 LjG1.1_chr4 306718 321680 +
3 domain predictions
1 GO term