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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR008709
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.933s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1852280.1
n.a. PREDICTED: neurochondrin-like [Cicer arietinum] gi|502132440|ref|XP_004501361.1| chr1 22402916 22409547 -
3 domain predictions
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Lj1g3v1852280.2
n.a. PREDICTED: neurochondrin-like [Cicer arietinum] gi|502132440|ref|XP_004501361.1| chr1 22403287 22409547 -
3 domain predictions
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Lj1g3v1852290.1
n.a. PREDICTED: neurochondrin-like [Cicer arietinum] gi|502132440|ref|XP_004501361.1| chr1 22409680 22411011 -
3 domain predictions
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Lj1g3v1852290.2
n.a. PREDICTED: neurochondrin-like [Cicer arietinum] gi|502132440|ref|XP_004501361.1| chr1 22409680 22412726 -
3 domain predictions
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Lj3g3v3189730.1
n.a. PREDICTED: U-box domain-containing protein 13-like [Glycine max] gi|356539016|ref|XP_003537996.1| chr3 39447514 39452228 -
2 domain predictions
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LotjaGi1g1v0380400_LC.1
n.a. Neurochondrin protein; TAIR: AT4G32050.1 neurochondrin family protein; Swiss-Prot: sp|Q640K1|NCDN_XENLA Neurochondrin; TrEMBL-Plants: tr|A0A1J7G7X5|A0A1J7G7X5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0380400_LC LjG1.1_chr1 86197209 86207298 +
3 domain predictions
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LotjaGi1g1v0380400_LC.2
n.a. Neurochondrin; TAIR: AT4G32050.1 neurochondrin family protein; Swiss-Prot: sp|Q640K1|NCDN_XENLA Neurochondrin; TrEMBL-Plants: tr|A0A0L9TTX7|A0A0L9TTX7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0380400_LC LjG1.1_chr1 86197209 86207298 +
3 domain predictions
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LotjaGi1g1v0380400_LC.3
n.a. Neurochondrin protein; TAIR: AT4G32050.1 neurochondrin family protein; Swiss-Prot: sp|Q640K1|NCDN_XENLA Neurochondrin; TrEMBL-Plants: tr|A0A1J7G7X5|A0A1J7G7X5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0380400_LC LjG1.1_chr1 86197346 86207084 +
3 domain predictions
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LotjaGi1g1v0380400_LC.4
n.a. Neurochondrin protein; TAIR: AT4G32050.1 neurochondrin family protein; Swiss-Prot: sp|Q09562|GADR3_CAEEL Gastrulation-defective protein 3; TrEMBL-Plants: tr|G7JAE3|G7JAE3_MEDTR Neurochondrin protein; Found in the gene: LotjaGi1g1v0380400_LC LjG1.1_chr1 86197346 86207084 +
3 domain predictions
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LotjaGi1g1v0380500.1
n.a. Neurochondrin protein; TAIR: AT4G32050.1 neurochondrin family protein; Swiss-Prot: sp|Q640K1|NCDN_XENLA Neurochondrin; TrEMBL-Plants: tr|G7JAE3|G7JAE3_MEDTR Neurochondrin protein; Found in the gene: LotjaGi1g1v0380500 LjG1.1_chr1 86241396 86251150 +
3 domain predictions
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LotjaGi2g1v0372400.1
n.a. U-box domain-containing protein; TAIR: AT3G46510.1 plant U-box 13; Swiss-Prot: sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13; TrEMBL-Plants: tr|A0A072UM21|A0A072UM21_MEDTR Armadillo/beta-catenin repeat protein; Found in the gene: LotjaGi2g1v0372400 LjG1.1_chr2 86928067 86933462 -
2 domain predictions
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LotjaGi5g1v0097400_LC.1
n.a. Neurochondrin; TAIR: AT4G32050.1 neurochondrin family protein; Swiss-Prot: sp|Q640K1|NCDN_XENLA Neurochondrin; TrEMBL-Plants: tr|I1JG18|I1JG18_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0097400_LC LjG1.1_chr5 17215061 17223104 -
3 domain predictions
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LotjaGi5g1v0097400_LC.2
n.a. Neurochondrin protein; TAIR: AT4G32050.1 neurochondrin family protein; Swiss-Prot: sp|Q640K1|NCDN_XENLA Neurochondrin; TrEMBL-Plants: tr|A0A072VCP4|A0A072VCP4_MEDTR Neurochondrin protein; Found in the gene: LotjaGi5g1v0097400_LC LjG1.1_chr5 17215061 17223104 -
3 domain predictions
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LotjaGi5g1v0097400_LC.3
n.a. Neurochondrin; TAIR: AT4G32050.1 neurochondrin family protein; Swiss-Prot: sp|Q640K1|NCDN_XENLA Neurochondrin; TrEMBL-Plants: tr|I1JG18|I1JG18_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0097400_LC LjG1.1_chr5 17215087 17222993 -
3 domain predictions
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LotjaGi5g1v0097400_LC.4
n.a. Neurochondrin protein; TAIR: AT4G32050.1 neurochondrin family protein; Swiss-Prot: sp|Q640K1|NCDN_XENLA Neurochondrin; TrEMBL-Plants: tr|A0A072VCP4|A0A072VCP4_MEDTR Neurochondrin protein; Found in the gene: LotjaGi5g1v0097400_LC LjG1.1_chr5 17215087 17222993 -
3 domain predictions
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