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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011037
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 42 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.494s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0268789.1
n.a. PREDICTED: pyruvate kinase isozyme G, chloroplastic-like [Glycine max] gi|356559692|ref|XP_003548131.1| chr0 139201713 139208525 -
2 domain predictions
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Lj1g3v4693090.1
n.a. PREDICTED: pyruvate kinase, cytosolic isozyme-like [Glycine max] gi|356505306|ref|XP_003521432.1| chr1 55776279 55783340 -
2 domain predictions
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Lj1g3v4693090.2
n.a. PREDICTED: pyruvate kinase, cytosolic isozyme-like [Glycine max] gi|356505306|ref|XP_003521432.1| chr1 55776279 55783340 -
2 domain predictions
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Lj2g3v0915120.1
n.a. pyruvate kinase [Glycine max] gi|22296818|gb|AAM94348.1| chr2 14479829 14486179 -
2 domain predictions
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Lj2g3v0915120.2
n.a. pyruvate kinase [Glycine max] gi|351725077|ref|NP_001236056.1| chr2 14479829 14485196 -
2 domain predictions
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Lj2g3v1985200.1
n.a. PREDICTED: pyruvate kinase isozyme G, chloroplastic-like isoform X1 [Cicer arietinum] gi|502160529|ref|XP_004511775.1| chr2 29334795 29340776 -
2 domain predictions
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Lj3g3v0931370.1
n.a. PREDICTED: pyruvate kinase isozyme G, chloroplastic-like [Glycine max] gi|356576030|ref|XP_003556138.1| chr3 11028354 11033301 -
2 domain predictions
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Lj4g3v0668380.1
n.a. Pyruvate kinase [Medicago truncatula] gi|357510595|ref|XP_003625586.1| chr4 11073985 11077340 +
2 domain predictions
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Lj4g3v0668400.1
n.a. PREDICTED: pyruvate kinase, cytosolic isozyme-like [Cucumis sativus] gi|449463834|ref|XP_004149636.1| chr4 11079766 11082954 +
2 domain predictions
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Lj5g3v1207980.1
n.a. PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Cicer arietinum] gi|502116389|ref|XP_004495407.1| chr5 19601257 19608923 -
2 domain predictions
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Lj5g3v1737100.1
n.a. PREDICTED: pyruvate kinase, cytosolic isozyme-like [Glycine max] gi|356576333|ref|XP_003556287.1| chr5 24930143 24938162 -
2 domain predictions
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Lj5g3v2063160.1
n.a. PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Cicer arietinum] gi|502119986|ref|XP_004496809.1| chr5 29901588 29905461 +
2 domain predictions
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Lj6g3v1392460.1
n.a. PREDICTED: MOSC domain-containing protein 2, mitochondrial-like [Cicer arietinum] gi|502085355|ref|XP_004487898.1| chr6 16593429 16597091 +
2 domain predictions
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Lj6g3v1392460.2
n.a. Molybdenum cofactor sulfurase [Medicago truncatula] gi|357449163|ref|XP_003594858.1| chr6 16600397 16603996 +
2 domain predictions
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LotjaGi1g1v0681400.1
n.a. Pyruvate kinase; TAIR: AT3G52990.1 Pyruvate kinase family protein; Swiss-Prot: sp|B8BJ39|KPYC1_ORYSI Pyruvate kinase 1, cytosolic; TrEMBL-Plants: tr|I1JPV5|I1JPV5_SOYBN Pyruvate kinase; Found in the gene: LotjaGi1g1v0681400 LjG1.1_chr1 124864079 124871161 +
2 domain predictions
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LotjaGi1g1v0681400.3
n.a. Pyruvate kinase; TAIR: AT3G52990.1 Pyruvate kinase family protein; Swiss-Prot: sp|B8BJ39|KPYC1_ORYSI Pyruvate kinase 1, cytosolic; TrEMBL-Plants: tr|A0A0R0EXX1|A0A0R0EXX1_SOYBN Pyruvate kinase; Found in the gene: LotjaGi1g1v0681400 LjG1.1_chr1 124864304 124870835 +
2 domain predictions
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LotjaGi2g1v0137500.1
n.a. Pyruvate kinase; TAIR: AT5G52920.1 plastidic pyruvate kinase beta subunit 1; Swiss-Prot: sp|Q9FLW9|PKP2_ARATH Plastidial pyruvate kinase 2; TrEMBL-Plants: tr|A0A1J7GIR3|A0A1J7GIR3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0137500 LjG1.1_chr2 50253797 50260738 -
2 domain predictions
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LotjaGi2g1v0137500.2
n.a. Pyruvate kinase; TAIR: AT5G52920.1 plastidic pyruvate kinase beta subunit 1; Swiss-Prot: sp|Q9FLW9|PKP2_ARATH Plastidial pyruvate kinase 2; TrEMBL-Plants: tr|I1MPC6|I1MPC6_SOYBN Pyruvate kinase; Found in the gene: LotjaGi2g1v0137500 LjG1.1_chr2 50254390 50260246 -
2 domain predictions
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LotjaGi2g1v0157400.1
n.a. Pyruvate kinase; TAIR: AT3G52990.1 Pyruvate kinase family protein; Swiss-Prot: sp|B8BJ39|KPYC1_ORYSI Pyruvate kinase 1, cytosolic; TrEMBL-Plants: tr|A0A072VP40|A0A072VP40_MEDTR Pyruvate kinase; Found in the gene: LotjaGi2g1v0157400 LjG1.1_chr2 55669945 55680497 +
2 domain predictions
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LotjaGi2g1v0157400.2
n.a. Pyruvate kinase; TAIR: AT3G52990.1 Pyruvate kinase family protein; Swiss-Prot: sp|B8BM17|KPYC2_ORYSI Pyruvate kinase 2, cytosolic; TrEMBL-Plants: tr|A0A072VP40|A0A072VP40_MEDTR Pyruvate kinase; Found in the gene: LotjaGi2g1v0157400 LjG1.1_chr2 55670335 55677951 +
2 domain predictions
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LotjaGi2g1v0157400.3
n.a. Pyruvate kinase; TAIR: AT3G52990.1 Pyruvate kinase family protein; Swiss-Prot: sp|B8BJ39|KPYC1_ORYSI Pyruvate kinase 1, cytosolic; TrEMBL-Plants: tr|A0A072VP40|A0A072VP40_MEDTR Pyruvate kinase; Found in the gene: LotjaGi2g1v0157400 LjG1.1_chr2 55670335 55677951 +
2 domain predictions
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LotjaGi2g1v0157400.4
n.a. Pyruvate kinase; TAIR: AT3G52990.1 Pyruvate kinase family protein; Swiss-Prot: sp|B8BJ39|KPYC1_ORYSI Pyruvate kinase 1, cytosolic; TrEMBL-Plants: tr|A0A072VP40|A0A072VP40_MEDTR Pyruvate kinase; Found in the gene: LotjaGi2g1v0157400 LjG1.1_chr2 55671237 55677951 +
2 domain predictions
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LotjaGi2g1v0157400.5
n.a. Pyruvate kinase; TAIR: AT3G52990.1 Pyruvate kinase family protein; Swiss-Prot: sp|B8BJ39|KPYC1_ORYSI Pyruvate kinase 1, cytosolic; TrEMBL-Plants: tr|A0A072VP40|A0A072VP40_MEDTR Pyruvate kinase; Found in the gene: LotjaGi2g1v0157400 LjG1.1_chr2 55671389 55677951 +
2 domain predictions
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LotjaGi2g1v0157400.6
n.a. Pyruvate kinase; TAIR: AT3G52990.1 Pyruvate kinase family protein; Swiss-Prot: sp|B8BJ39|KPYC1_ORYSI Pyruvate kinase 1, cytosolic; TrEMBL-Plants: tr|A0A072VP40|A0A072VP40_MEDTR Pyruvate kinase; Found in the gene: LotjaGi2g1v0157400 LjG1.1_chr2 55672214 55677951 +
2 domain predictions
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LotjaGi2g1v0236700.1
n.a. Pyruvate kinase; TAIR: AT5G08570.1 Pyruvate kinase family protein; Swiss-Prot: sp|Q42806|KPYC_SOYBN Pyruvate kinase, cytosolic isozyme; TrEMBL-Plants: tr|I3STS9|I3STS9_LOTJA Pyruvate kinase; Found in the gene: LotjaGi2g1v0236700 LjG1.1_chr2 69769070 69776138 -
2 domain predictions
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LotjaGi2g1v0415900.1
n.a. Pyruvate kinase; TAIR: AT1G32440.1 plastidial pyruvate kinase 3; Swiss-Prot: sp|Q40546|KPYG_TOBAC Pyruvate kinase isozyme G, chloroplastic; TrEMBL-Plants: tr|A0A151TJ29|A0A151TJ29_CAJCA Pyruvate kinase; Found in the gene: LotjaGi2g1v0415900 LjG1.1_chr2 91360708 91374479 -
2 domain predictions
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LotjaGi2g1v0415900.2
n.a. Pyruvate kinase; TAIR: AT1G32440.1 plastidial pyruvate kinase 3; Swiss-Prot: sp|Q40546|KPYG_TOBAC Pyruvate kinase isozyme G, chloroplastic; TrEMBL-Plants: tr|A0A151TJ29|A0A151TJ29_CAJCA Pyruvate kinase; Found in the gene: LotjaGi2g1v0415900 LjG1.1_chr2 91360708 91374479 -
2 domain predictions
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LotjaGi2g1v0415900.3
n.a. Pyruvate kinase; TAIR: AT1G32440.1 plastidial pyruvate kinase 3; Swiss-Prot: sp|Q40546|KPYG_TOBAC Pyruvate kinase isozyme G, chloroplastic; TrEMBL-Plants: tr|A0A151TJ29|A0A151TJ29_CAJCA Pyruvate kinase; Found in the gene: LotjaGi2g1v0415900 LjG1.1_chr2 91368215 91374189 -
2 domain predictions
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LotjaGi4g1v0086700.1
n.a. Pyruvate kinase; TAIR: AT5G56350.1 Pyruvate kinase family protein; Swiss-Prot: sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme; TrEMBL-Plants: tr|G7L1R3|G7L1R3_MEDTR Pyruvate kinase; Found in the gene: LotjaGi4g1v0086700 LjG1.1_chr4 11497536 11501139 +
2 domain predictions
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LotjaGi4g1v0086700.2
n.a. Pyruvate kinase; TAIR: AT5G56350.1 Pyruvate kinase family protein; Swiss-Prot: sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme; TrEMBL-Plants: tr|A0A0A0L1N0|A0A0A0L1N0_CUCSA Pyruvate kinase; Found in the gene: LotjaGi4g1v0086700 LjG1.1_chr4 11497536 11507003 +
2 domain predictions
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LotjaGi4g1v0086700.3
n.a. Pyruvate kinase; TAIR: AT5G56350.1 Pyruvate kinase family protein; Swiss-Prot: sp|Q42954|KPYC_TOBAC Pyruvate kinase, cytosolic isozyme; TrEMBL-Plants: tr|A0A0A0L1N0|A0A0A0L1N0_CUCSA Pyruvate kinase; Found in the gene: LotjaGi4g1v0086700 LjG1.1_chr4 11503234 11506958 +
2 domain predictions
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LotjaGi5g1v0089700.1
n.a. Pyruvate kinase; TAIR: AT3G52990.1 Pyruvate kinase family protein; Swiss-Prot: sp|B8BJ39|KPYC1_ORYSI Pyruvate kinase 1, cytosolic; TrEMBL-Plants: tr|A0A151U359|A0A151U359_CAJCA Pyruvate kinase; Found in the gene: LotjaGi5g1v0089700 LjG1.1_chr5 15610009 15618115 -
2 domain predictions
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LotjaGi5g1v0089700.4
n.a. Pyruvate kinase; TAIR: AT3G52990.1 Pyruvate kinase family protein; Swiss-Prot: sp|B8BJ39|KPYC1_ORYSI Pyruvate kinase 1, cytosolic; TrEMBL-Plants: tr|A0A151U359|A0A151U359_CAJCA Pyruvate kinase; Found in the gene: LotjaGi5g1v0089700 LjG1.1_chr5 15610743 15617694 -
2 domain predictions
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LotjaGi5g1v0089700.5
n.a. Pyruvate kinase; TAIR: AT3G52990.1 Pyruvate kinase family protein; Swiss-Prot: sp|B8BJ39|KPYC1_ORYSI Pyruvate kinase 1, cytosolic; TrEMBL-Plants: tr|A0A151U359|A0A151U359_CAJCA Pyruvate kinase; Found in the gene: LotjaGi5g1v0089700 LjG1.1_chr5 15610743 15617694 -
2 domain predictions
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LotjaGi5g1v0193600.1
n.a. Pyruvate kinase; TAIR: AT3G22960.1 Pyruvate kinase family protein; Swiss-Prot: sp|Q43117|KPYA_RICCO Pyruvate kinase isozyme A, chloroplastic; TrEMBL-Plants: tr|A0A0L9TYK9|A0A0L9TYK9_PHAAN Pyruvate kinase; Found in the gene: LotjaGi5g1v0193600 LjG1.1_chr5 48799435 48808002 -
2 domain predictions
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LotjaGi5g1v0294300.1
n.a. Pyruvate kinase; TAIR: AT5G52920.1 plastidic pyruvate kinase beta subunit 1; Swiss-Prot: sp|Q9FLW9|PKP2_ARATH Plastidial pyruvate kinase 2; TrEMBL-Plants: tr|I1LDJ1|I1LDJ1_SOYBN Pyruvate kinase; Found in the gene: LotjaGi5g1v0294300 LjG1.1_chr5 61169609 61175690 -
2 domain predictions
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LotjaGi5g1v0294300.2
n.a. Pyruvate kinase; TAIR: AT5G52920.1 plastidic pyruvate kinase beta subunit 1; Swiss-Prot: sp|Q9FLW9|PKP2_ARATH Plastidial pyruvate kinase 2; TrEMBL-Plants: tr|I1NH00|I1NH00_SOYBN Pyruvate kinase; Found in the gene: LotjaGi5g1v0294300 LjG1.1_chr5 61170605 61175541 -
2 domain predictions
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LotjaGi5g1v0294300.3
n.a. Pyruvate kinase; TAIR: AT5G52920.1 plastidic pyruvate kinase beta subunit 1; Swiss-Prot: sp|Q9FLW9|PKP2_ARATH Plastidial pyruvate kinase 2; TrEMBL-Plants: tr|I1NH00|I1NH00_SOYBN Pyruvate kinase; Found in the gene: LotjaGi5g1v0294300 LjG1.1_chr5 61171025 61175192 -
2 domain predictions
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LotjaGi5g1v0294300.4
n.a. Pyruvate kinase; TAIR: AT5G52920.1 plastidic pyruvate kinase beta subunit 1; Swiss-Prot: sp|Q9FLW9|PKP2_ARATH Plastidial pyruvate kinase 2; TrEMBL-Plants: tr|A0A151U6B0|A0A151U6B0_CAJCA Pyruvate kinase; Found in the gene: LotjaGi5g1v0294300 LjG1.1_chr5 61171110 61175063 -
2 domain predictions
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LotjaGi5g1v0319500.1
n.a. Pyruvate kinase; TAIR: AT3G22960.1 Pyruvate kinase family protein; Swiss-Prot: sp|Q43117|KPYA_RICCO Pyruvate kinase isozyme A, chloroplastic; TrEMBL-Plants: tr|I1NG47|I1NG47_SOYBN Pyruvate kinase; Found in the gene: LotjaGi5g1v0319500 LjG1.1_chr5 63685157 63689733 +
2 domain predictions
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LotjaGi6g1v0244900.1
n.a. Molybdenum cofactor sulfurase family protein; TAIR: AT1G30910.1 Molybdenum cofactor sulfurase family protein; Swiss-Prot: sp|Q5VT66|MARC1_HUMAN Mitochondrial amidoxime-reducing component 1; TrEMBL-Plants: tr|I3SXQ0|I3SXQ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0244900 LjG1.1_chr6 55739275 55743521 -
2 domain predictions
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LotjaGi6g1v0245000.1
n.a. Molybdenum cofactor sulfurase family protein; TAIR: AT1G30910.1 Molybdenum cofactor sulfurase family protein; Swiss-Prot: sp|O88994|MARC2_RAT Mitochondrial amidoxime reducing component 2; TrEMBL-Plants: tr|I3SXQ0|I3SXQ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0245000 LjG1.1_chr6 55746226 55750328 -
2 domain predictions
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