Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi6g1v0244900.1

Overview

Field Value
Gene ID LotjaGi6g1v0244900
Transcript ID LotjaGi6g1v0244900.1
Lotus japonicus genome version Gifu v1.2
Description Molybdenum cofactor sulfurase family protein; TAIR: AT1G30910.1 Molybdenum cofactor sulfurase family protein; Swiss-Prot: sp|Q5VT66|MARC1_HUMAN Mitochondrial amidoxime-reducing component 1; TrEMBL-Plants: tr|I3SXQ0|I3SXQ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0244900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:55739275..55743521) extracted from Lotus japonicus Gifu genome v1.2.

GAAAGAGGTGAAATTGGAGTGGAAGTGGAAATGATTGTCAACTATCAATGTATGAAAGTTATTTTCACTCATACCATCTG CAATTAATTTGAATAATGAATATGGTGGTGTTAGTTAAAAAATATAGTGATGCTAATCGAAACCCGTACAATGCTATCCT ATGTTAATATTATAAAAAATTCTAGTAACACTCAGTTTTCTATAAATGTAAATATAGGTCACATTTTCATTTTAATAGGA CACATAAAGTGAGTGCCTGTACGACTCCTATGATATTATTTAATTCATCTAACTACTAGTCTATCTAGACTGCAAGAAAA AATGGGGGCAGGAGCATCAGCAAGAGCATCAGTATCACCAATTCTTACAATAACAGCATCAGCAACAACAACAGAAATAC CAGGAGGCAAAGTTTCAGACATCTTTGTATATCCAATCAAGTCATGCCGTGGAATTTCTGTTTCCAGTGCTCCCTTCACT CCTGCTGGTATTTATAAACAAACTACATACCCCTCTATTATTATTTTTCGTTTTTTAATATTTAAGAGATTTTTTGGTTT GACTTGACATGTTCAATTATTCTCTTGGCAGGATTTCGGTGGGATAGAGAATGGATGGTGGTGAATTCCAGAGGGAAGGC AATCAGTCAGAGGAATGAACCCAAGCTTGCTTTGGTTCATGTTGATCTGCCAAATGAGGCATTTGCTGAAGATTGGCAAG CTCCAGAGGATTCCTTTATGGGTATATTGCATTTGCTTAGGGTTTTATTGTGTAAGCAATTTAGTGCATGTTTGAAAACT TGTTCGGAAACTACGATGAAGTCAAAATCACAGTTGACAGACGCAAATTCCATTAACTTTTGCTTCTGTCCACTATGATT TTGGCTTCACCGTGGTTTCGAACAAGTTTCCAATCACACTTATGGTATAAGATAATTTGATAAATAAGCTCAAAATAGCT TATAGTAGTTAGATGATAAACTATTCTAGGCGGCAACTTATGAAAATAAGTTCAAAACAATCTAATGTCTTGTTTTTATA AGCTTATCCAAACACTTAATTAGCGATTATACTATAAATCAGTGCAAATAAGCTCTTCCAAACTTAGTATTGACTCATGA TCTCTTTCTCTGCACATTTCTCATGATCACGAATTCATGATTGTTTTTCTTTTATCTAGTAGATGAATATAATGTCACTA TGTTCATATTACAGAGTTGAAAGCACCTGGGATGCAACCTCTCAAGGTTTGTTTGGGAAAACAACCAGAATTAAAAAATG GTTTCTCAGTATGGGAATGGACTGGATCTGCTTGGGATGAGGGATCTGAAGCATCACAGTGGTTCTCAGCTTTTTTGGGA AAACCCAGTCAACTGGTCCGCTTCAATACTGGTAGGTCTTGAAGTTATGAAACCTTAGAATAAAATAATGAGAACAAAAT TGTTTAGAAAGATATGTTACTTTAGACATGTAATGAATTCTTAAGGCCTATAACTGTTTCAAGAGCACATTAGCATTGCA GGGATTAACTTAGGGCATTGTATATTCATATTGACATGTATGATTCACATAAGTGCATCAGGTAGCATAAATAGCCATGA TAGCTCTCGAGTGTAATATTTATTTCAAAGCCCCGGAATTGTTACGAAATTCTTCCATGTTTCCTAATGCAGCTTCAGAA GTTAGACAAGTGGATCCTGATTATGTTAAGGGACATCATCCAACCTTGTTCACTGATGGTTATCCATTCTTACTCTCATC TCAGGTCAGTCCAGTTGAGAAATGAAGTCCAAATTTACTTATATGCTGAATCGTTACTCAGTATTTGTTATTTGTGACTT TCAGGATTCATTGAATGCTCTAAACGAGCTACTTGAGGAACCCATAAATATCAATCGGTTTAGAGCCAAGTATTGATTTT TCCATGTCTTTTTGTCTACTCTAGTAAATATATTGTTTAGTAATACTTGTTACTAATTTAAATCAGATTGTACTGAAATG AATTGATCTAAATGGATTATAGATTACATCATTGAGATTTGGGTAGTTCATGGTGCAGTATCCTCGTTGAAGGCTGTGAA CCATTTGCTGAAGATTTATGGTCAGAGATCAAGATAGGCAGGTTTTCATTTCTGGGATCCAAGATGTGTGGCCGTTGTAA GGTGAAGAGTTCTTTATTCTTGATCCTGGGGGATTGGTGTTGCCCAATATCCATATCTTTTCGTTACTGTCAATTGATTT TGTTCTTTATGTCCTTAGCTGGTTCTTTAATTTACTATTAGTTATTTGACTCGATCTCTTGATTGTAAAATGATCACCAC TGAAGACTGTCATTTTATAGTTCGGGGAATCCGGAAGAATGATTGGTTAGGAATGCGAGTCCTAGGTCCTCGATGAACTA CTTAACCCTTTTTGTATTTTGCTCTGGCATGGATTTTCCTCTCATCATCCATGCTTAGTTTGGTCCTCCTAGCCTCTTCA AACCATAGGTAACAGTGTCGAGTCTCTCCAAATTGTCTAGTCTATATTGTCAGCAGTGTTATCTTGGGAATCTTTCTTGT CGATTTTCCAATAGAGTGTTTGATCGACCTATGTCTCGTTTTGCCCAAGTTTACTTGATGTTCAGTATCCTACTCTGGTT GAGTTTCATTTGCTGCTTCTATTGATGATTAGTTACTCTTGTTATACATAGTTTATTTTTTTCCTGTAAAACTGGTGTGT GATGTTTTGTATCTTTTAGAATTTCTATTATGAAATTAAAACTCAATTTGGTGTTCCCATTTCATGTTGACAAGTGACAA TGCTTGTGAATAGTTATCTCAACTTTGTATACTTTGATGTCTTTTAATAATATTTGTCACCATCTTGTACCTATACCACT CAACTAAATAGTGGTGGTGAATTTGGGAAATTAACAAATATCATAATAGTAACAGGTTATAAGGAGCTCAAGATCAATTG ATCATCCTCCCTTCTTCTGAATAGAGGGTGCCAAAATTAAATTTAACAATCACACCTGTATTAGAAATTAAATTTAGAAG TAAAGGCCTCTCCTTTGAGGTTGGGAGAGTGATGACGCAAATATTTATGGTTTCATTTTGTTATGGCGATTATTAGTTTT ATGTGGAAGGATGTTGTTGGTCTCTAACAAGGGATTTATAGGGCAAGAGATGAAATCTCTATCTGGCTCAGTATTGAATA AACTTGTGTTTGAAGCTCCTTTATTTTTCTTACTCTGATTTAGACATTTCTTATTGGTTGTACACTCACATCTATGTACC TGTTAGTCTTTGATCTACTTGCTGCACTATTATTGCCTGTATACATTGGATTATCATATGGATAGTATATGCAGTTTAGT GTCTTCATACTAGTTACAAAGTCTAGTTGTGTATCCAAATTGCACTATTGATGTTGTTTGTTATGGTCAGATAACCACAA CCGACCAAGAGACGGCAATAGTTGGACGTGAACCACTTCAAACTCTTATGACATTTAGGTCTGGTAAACTCATAAGACCG CAAGACAAAAAGAATAGAGCCATGGTGAGGCATTCAGTTATGAGGCTTTCATTGAATATTATGTATTACATTGGTTCAAT GATGTCAAATGACATGTTAACTGCTTCTGCAGTCATACTTTGGTCAGTACGTGGTCTGGAACTGGAACGATTCTTCTGCT AAAGGAAGTGGAAAAGTCCTTAAAGTGGGAGATCCTGTTTATGTTCTTCAAAAGTTCTCTTCTCCTGCTGAAGCACCTGC TTAAGCCATGCATGTAGAATCTGCATCAGTCCTGTACTAGAAAATAAAAGGCTGTACAATAAACAAACTTATGGAACACT ATTACCCGTGGCTATGATGGAAATAAGAGACTCTTGGGTTGCTGAACTTTGCCTTGCATAATTGTAACTAGTAATGCTTC TATTTGTGGATTTAGTGATCTGCAATATTGCTAAAATCTCAATGGTTATAATTTGGCACTTGCACTTCCGAGGGTTACAT AACATTAAGTTGGGACCTGCAAGTTCAACTATATAAAGGATTTAAACAAGGCTTGTGCAAAAAGTAAAAAGACCTTTCAT TTGTTTTCTATTTTCATTTTGTTGATATGTTTTTATTGAAAGAAAATACTAGACAGCCAAAGTTTTGTTACCAGGATTCT TGCTTGAATGAGTTGGCATTGCTATTGATTAGTTGATAGAGGAGTGGTTCACTGGTTTATGTCACTTAAGCTCATCTAAC AGCCAGG
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0244900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGGGCAGGAGCATCAGCAAGAGCATCAGTATCACCAATTCTTACAATAACAGCATCAGCAACAACAACAGAAATACC AGGAGGCAAAGTTTCAGACATCTTTGTATATCCAATCAAGTCATGCCGTGGAATTTCTGTTTCCAGTGCTCCCTTCACTC CTGCTGGATTTCGGTGGGATAGAGAATGGATGGTGGTGAATTCCAGAGGGAAGGCAATCAGTCAGAGGAATGAACCCAAG CTTGCTTTGGTTCATGTTGATCTGCCAAATGAGGCATTTGCTGAAGATTGGCAAGCTCCAGAGGATTCCTTTATGGAGTT GAAAGCACCTGGGATGCAACCTCTCAAGGTTTGTTTGGGAAAACAACCAGAATTAAAAAATGGTTTCTCAGTATGGGAAT GGACTGGATCTGCTTGGGATGAGGGATCTGAAGCATCACAGTGGTTCTCAGCTTTTTTGGGAAAACCCAGTCAACTGGTC CGCTTCAATACTGCTTCAGAAGTTAGACAAGTGGATCCTGATTATGTTAAGGGACATCATCCAACCTTGTTCACTGATGG TTATCCATTCTTACTCTCATCTCAGGATTCATTGAATGCTCTAAACGAGCTACTTGAGGAACCCATAAATATCAATCGGT TTAGAGCCAATATCCTCGTTGAAGGCTGTGAACCATTTGCTGAAGATTTATGGTCAGAGATCAAGATAGGCAGGTTTTCA TTTCTGGGATCCAAGATGTGTGGCCGTTGTAAGATAACCACAACCGACCAAGAGACGGCAATAGTTGGACGTGAACCACT TCAAACTCTTATGACATTTAGGTCTGGTAAACTCATAAGACCGCAAGACAAAAAGAATAGAGCCATGTCATACTTTGGTC AGTACGTGGTCTGGAACTGGAACGATTCTTCTGCTAAAGGAAGTGGAAAAGTCCTTAAAGTGGGAGATCCTGTTTATGTT CTTCAAAAGTTCTCTTCTCCTGCTGAAGCACCTGCTTAA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0244900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGAGASARASVSPILTITASATTTEIPGGKVSDIFVYPIKSCRGISVSSAPFTPAGFRWDREWMVVNSRGKAISQRNEPK LALVHVDLPNEAFAEDWQAPEDSFMELKAPGMQPLKVCLGKQPELKNGFSVWEWTGSAWDEGSEASQWFSAFLGKPSQLV RFNTASEVRQVDPDYVKGHHPTLFTDGYPFLLSSQDSLNALNELLEEPININRFRANILVEGCEPFAEDLWSEIKIGRFS FLGSKMCGRCKITTTDQETAIVGREPLQTLMTFRSGKLIRPQDKKNRAMSYFGQYVVWNWNDSSAKGSGKVLKVGDPVYV LQKFSSPAEAPA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP_GRAM_POSITIVE
SignalP-TM
1 21 21 - –
PANTHER
PTHR14237
19 326 308 3.1E-105 –
PANTHER
PTHR14237:SF61
19 326 308 3.1E-105 –
Pfam
PF03476
29 156 128 5.7E-34
IPR005303
SUPERFAMILY
SSF50800
29 267 239 2.3E-9
IPR011037
SUPERFAMILY
SSF141673
31 169 139 1.11E-34 –
ProSiteProfiles
PS51340
163 321 159 29.81
IPR005302
Pfam
PF03473
181 319 139 2.4E-27
IPR005302

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0030151
Molecular function Molybdenum ion binding Interacting selectively and non-covalently with molybdenum (Mo) ions.
Subterm of
GO:0030170
Molecular function Pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0244900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…