Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj1g3v4693090.1

Overview

Field Value
Gene ID Lj1g3v4693090
Transcript ID Lj1g3v4693090.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: pyruvate kinase, cytosolic isozyme-like [Glycine max] gi|356505306|ref|XP_003521432.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 450 450 0
PANTHER 1 450 450 0
SUPERFAMILY 5 101 97 8.03E-75
TIGRFAM 30 441 412 5.50E-106
Gene3D 30 98 69 3.60E-79
Pfam 30 374 345 2.40E-91
PRINTS 85 101 17 9.80E-42
Gene3D 99 186 88 3.10E-08
SUPERFAMILY 103 186 84 1.69E-06
SUPERFAMILY 201 376 176 8.03E-75
Gene3D 202 361 160 3.60E-79
PRINTS 221 235 15 9.80E-42
PRINTS 253 279 27 9.80E-42
PRINTS 280 304 25 9.80E-42
PRINTS 329 347 19 9.80E-42
PRINTS 348 364 17 9.80E-42
Gene3D 362 539 178 1.40E-42
SUPERFAMILY 389 438 50 6.50E-20
Pfam 395 537 143 9.20E-25
SUPERFAMILY 467 529 63 6.50E-20
PANTHER 473 542 70 0
PANTHER 473 542 70 0

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Molecular function Pyruvate kinase activity Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate.
Biological process Glycolytic process The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
Molecular function Potassium ion binding Interacting selectively and non-covalently with potassium (K+) ions.

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj1g3v4693090.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4693090.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.