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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013025
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.483s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0012009.1
n.a. PREDICTED: 50S ribosomal protein L23-like [Cucumis sativus] gi|449438835|ref|XP_004137193.1| chr0 4533246 4534430 +
2 domain predictions
3 GO terms
Lj0g3v0081139.1
n.a. PREDICTED: 60S ribosomal protein L23a-like isoform X1 [Cicer arietinum] gi|502145131|ref|XP_004505894.1| chr0 31632281 31636064 -
3 domain predictions
3 GO terms
Lj0g3v0323899.1
n.a. 50S ribosomal protein L23 [Medicago truncatula] gi|357463337|ref|XP_003601950.1| chr0 169192545 169193117 -
2 domain predictions
3 GO terms
Lj1g3v2139740.1
n.a. PREDICTED: 50S ribosomal protein L23-like [Cucumis sativus] gi|449438835|ref|XP_004137193.1| chr1 25726231 25726803 +
2 domain predictions
3 GO terms
Lj1g3v3194560.1
n.a. PREDICTED: 60S ribosomal protein L23a-like [Glycine max] gi|356568957|ref|XP_003552674.1| chr1 36281028 36282753 +
3 domain predictions
3 GO terms
Lj3g3v3154060.1
n.a. PREDICTED: 60S ribosomal protein L23a-like [Cucumis sativus] gi|449459936|ref|XP_004147702.1| chr3 39112626 39114200 +
3 domain predictions
3 GO terms
Lj6g3v0528510.1
n.a. PREDICTED: 50S ribosomal protein L23-like [Glycine max] gi|356511093|ref|XP_003524264.1| chr6 5506987 5507875 +
3 domain predictions
3 GO terms
LotjaGi1g1v0533800.1
n.a. 50S ribosomal protein L23; TAIR: AT3G55280.1 ribosomal protein L23AB; Swiss-Prot: sp|Q9AT35|RL23A_DAUCA 60S ribosomal protein L23a; TrEMBL-Plants: tr|I3STQ8|I3STQ8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0533800 LjG1.1_chr1 106213778 106217901 +
3 domain predictions
3 GO terms
LotjaGi2g1v0368700.1
n.a. 50S ribosomal protein L23; TAIR: AT3G55280.1 ribosomal protein L23AB; Swiss-Prot: sp|Q9AT35|RL23A_DAUCA 60S ribosomal protein L23a; TrEMBL-Plants: tr|I3SBP7|I3SBP7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0368700 LjG1.1_chr2 86618418 86620474 +
3 domain predictions
3 GO terms
LotjaGi3g1v0280000.1
n.a. 50S ribosomal protein L23; TAIR: AT3G55280.1 ribosomal protein L23AB; Swiss-Prot: sp|Q9AT35|RL23A_DAUCA 60S ribosomal protein L23a; TrEMBL-Plants: tr|I3SAH8|I3SAH8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0280000 LjG1.1_chr3 55996324 56001123 +
3 domain predictions
3 GO terms
LotjaGi4g1v0397200.1
n.a. 50S ribosomal protein L23; TAIR: AT4G39880.1 Ribosomal protein L23/L15e family protein; Swiss-Prot: sp|A4ST04|RL23_AERS4 50S ribosomal protein L23; TrEMBL-Plants: tr|A0A151S376|A0A151S376_CAJCA 50S ribosomal protein L23; Found in the gene: LotjaGi4g1v0397200 LjG1.1_chr4 77485536 77486434 -
3 domain predictions
3 GO terms
LotjaGi6g1v0088200.1
n.a. 50S ribosomal protein L23; TAIR: AT4G39880.1 Ribosomal protein L23/L15e family protein; Swiss-Prot: sp|A0KF23|RL23_AERHH 50S ribosomal protein L23; TrEMBL-Plants: tr|A0A151U8Z8|A0A151U8Z8_CAJCA 50S ribosomal protein L23; Found in the gene: LotjaGi6g1v0088200 LjG1.1_chr6 17848210 17852615 +
2 domain predictions
3 GO terms