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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013221
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 18 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.340s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0094799.1
n.a. PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase-like [Cicer arietinum] gi|502139262|ref|XP_004503706.1| chr0 39864208 39869916 -
4 domain predictions
2 GO terms
Lj0g3v0206379.1
n.a. PREDICTED: folylpolyglutamate synthase-like isoform X3 [Cicer arietinum] gi|502169366|ref|XP_004514593.1| chr0 102843430 102846347 -
3 domain predictions
2 GO terms
Lj0g3v0206379.2
n.a. PREDICTED: folylpolyglutamate synthase-like isoform X3 [Cicer arietinum] gi|502169366|ref|XP_004514593.1| chr0 102843641 102846347 -
3 domain predictions
2 GO terms
Lj0g3v0272819.1
n.a. PREDICTED: folylpolyglutamate synthase, mitochondrial-like [Glycine max] gi|356569078|ref|XP_003552733.1| chr0 141381282 141393687 -
4 domain predictions
2 GO terms
Lj0g3v0272819.2
n.a. PREDICTED: folylpolyglutamate synthase, mitochondrial-like [Glycine max] gi|356569078|ref|XP_003552733.1| chr0 141381282 141393668 -
4 domain predictions
2 GO terms
Lj2g3v2659370.1
n.a. PREDICTED: folylpolyglutamate synthase, mitochondrial-like [Glycine max] gi|356551620|ref|XP_003544172.1| chr2 35782352 35789912 -
4 domain predictions
2 GO terms
Lj2g3v3340810.1
n.a. PREDICTED: LOW QUALITY PROTEIN: folylpolyglutamate synthase-like [Glycine max] gi|356551520|ref|XP_003544122.1| chr2 42865574 42868066 -
2 domain predictions
2 GO terms
Lj2g3v3340810.2
n.a. PREDICTED: folylpolyglutamate synthase-like isoform X1 [Cicer arietinum] gi|502124122|ref|XP_004498396.1| chr2 42865574 42874539 -
4 domain predictions
2 GO terms
Lj4g3v2963460.1
n.a. PREDICTED: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase-like [Cicer arietinum] gi|502139262|ref|XP_004503706.1| chr4 39219791 39224547 +
4 domain predictions
2 GO terms
Lj5g3v0868200.1
n.a. PREDICTED: folylpolyglutamate synthase-like isoform X1 [Cicer arietinum] gi|502169356|ref|XP_004514591.1| chr5 12435118 12452310 +
4 domain predictions
2 GO terms
Lj5g3v0868200.2
n.a. PREDICTED: folylpolyglutamate synthase, mitochondrial-like [Glycine max] gi|356537507|ref|XP_003537268.1| chr5 12435118 12452310 +
4 domain predictions
2 GO terms
Lj5g3v0868200.3
n.a. PREDICTED: folylpolyglutamate synthase, mitochondrial-like [Glycine max] gi|356537507|ref|XP_003537268.1| chr5 12435118 12452310 +
3 domain predictions
2 GO terms
LotjaGi1g1v0086300.1
n.a. Folylpolyglutamate synthase; TAIR: AT5G05980.2 DHFS-FPGS homolog B; Swiss-Prot: sp|F4K2A1|FPGS1_ARATH Folylpolyglutamate synthase; TrEMBL-Plants: tr|K7M5A2|K7M5A2_SOYBN Folylpolyglutamate synthase; Found in the gene: LotjaGi1g1v0086300 LjG1.1_chr1 12491074 12500344 +
2 domain predictions
2 GO terms
LotjaGi4g1v0427200.1
n.a. UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; TAIR: AT1G63680.1 ALBINO OR PALE-GREEN 13; Swiss-Prot: sp|Q03523|MURE_BACSU UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; TrEMBL-Plants: tr|A0A072U5D4|A0A072U5D4_MEDTR UDP-N-acetylmuramyl-tripeptide synthetase; Found in the gene: LotjaGi4g1v0427200 LjG1.1_chr4 80188003 80193579 +
2 domain predictions
2 GO terms
LotjaGi5g1v0134600.2
n.a. Folylpolyglutamate synthase; TAIR: AT3G10160.1 DHFS-FPGS homolog C; Swiss-Prot: sp|F4J2K2|FPGS2_ARATH Folylpolyglutamate synthase; TrEMBL-Plants: tr|I1JGE2|I1JGE2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0134600 LjG1.1_chr5 31880337 31898996 +
2 domain predictions
2 GO terms
LotjaGi5g1v0134600.3
n.a. Folylpolyglutamate synthase; TAIR: AT3G10160.1 DHFS-FPGS homolog C; Swiss-Prot: sp|F4J2K2|FPGS2_ARATH Folylpolyglutamate synthase; TrEMBL-Plants: tr|I1JGE2|I1JGE2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0134600 LjG1.1_chr5 31880337 31898996 +
2 domain predictions
2 GO terms
LotjaGi5g1v0134600.7
n.a. Folylpolyglutamate synthase; TAIR: AT3G10160.1 DHFS-FPGS homolog C; Swiss-Prot: sp|F4J2K2|FPGS2_ARATH Folylpolyglutamate synthase; TrEMBL-Plants: tr|I1JGE2|I1JGE2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0134600 LjG1.1_chr5 31880362 31897823 +
2 domain predictions
2 GO terms
LotjaGi6g1v0066300.1
n.a. Folylpolyglutamate synthase; TAIR: AT5G05980.1 DHFS-FPGS homolog B; Swiss-Prot: sp|F4K2A1|FPGS1_ARATH Folylpolyglutamate synthase; TrEMBL-Plants: tr|K7MPN5|K7MPN5_SOYBN Folylpolyglutamate synthase; Found in the gene: LotjaGi6g1v0066300 LjG1.1_chr6 12582717 12598897 +
2 domain predictions
2 GO terms