Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj0g3v0272819.2

Overview

Field Value
Gene ID Lj0g3v0272819
Transcript ID Lj0g3v0272819.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: folylpolyglutamate synthase, mitochondrial-like [Glycine max] gi|356569078|ref|XP_003552733.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF038895
4 464 461 2.70E-138
IPR023600
Gene3D
G3DSA:3.40.1190.10
12 309 298 4.60E-94
IPR013221
PANTHER
PTHR11136
15 364 350 4.80E-222
IPR001645
PANTHER
PTHR11136:SF6
15 364 350 4.80E-222 –
SUPERFAMILY
SSF53623
42 279 238 1.73E-79
IPR013221
TIGRFAM
TIGR01499
57 367 311 2.60E-89
IPR001645
ProSitePatterns
PS01011
65 88 24 –
IPR018109
Pfam
PF08245
67 216 150 5.30E-07
IPR013221
ProSitePatterns
PS01012
163 178 16 –
IPR018109
SUPERFAMILY
SSF53244
327 379 53 6.87E-05
IPR004101
PANTHER
PTHR11136
386 466 81 4.80E-222
IPR001645
PANTHER
PTHR11136:SF6
386 466 81 4.80E-222 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004326
Molecular function Tetrahydrofolylpolyglutamate synthase activity Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0009058
Biological process Biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Subterm of
GO:0009396
Biological process Folic acid-containing compound biosynthetic process The chemical reactions and pathways resulting in the formation of folic acid and its derivatives.
Subterm of
GO:0016874
Molecular function Ligase activity Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
Subterm of

Genome browser

LORE1 insertions 110

Expression data

Expression pattern

Expression pattern of Lj0g3v0272819.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0272819.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.