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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR014403
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.646s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0079909.1
n.a. PREDICTED: acid phosphatase 1-like [Cicer arietinum] gi|502158378|ref|XP_004511128.1| chr0 30878956 30882758 -
2 domain predictions
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Lj0g3v0316289.1
n.a. PREDICTED: acid phosphatase 1-like [Cicer arietinum] gi|502178688|ref|XP_004516313.1| chr0 165148145 165154488 +
2 domain predictions
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Lj3g3v2318310.1
n.a. PREDICTED: stem 28 kDa glycoprotein-like [Cicer arietinum] gi|502156123|ref|XP_004510320.1| chr3 28858874 28890882 -
2 domain predictions
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Lj6g3v0057910.1
n.a. PREDICTED: acid phosphatase 1-like [Glycine max] gi|356575237|ref|XP_003555748.1| chr6 951375 954187 -
2 domain predictions
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LotjaGi2g1v0227500.1
n.a. Acid phosphatase 1; TAIR: AT4G29260.1 HAD superfamily, subfamily IIIB acid phosphatase; Swiss-Prot: sp|P27061|PPA1_SOLLC Acid phosphatase 1; TrEMBL-Plants: tr|A0A1J7I355|A0A1J7I355_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0227500 LjG1.1_chr2 68431487 68436254 +
2 domain predictions
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LotjaGi3g1v0083800.1
n.a. Acid phosphatase 1; TAIR: AT2G38600.1 HAD superfamily, subfamily IIIB acid phosphatase; Swiss-Prot: sp|P27061|PPA1_SOLLC Acid phosphatase 1; TrEMBL-Plants: tr|I3T3F5|I3T3F5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0083800 LjG1.1_chr3 9450188 9455729 +
2 domain predictions
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LotjaGi3g1v0372400.1
n.a. Acid phosphatase-like protein 1; TAIR: AT5G51260.1 HAD superfamily, subfamily IIIB acid phosphatase; Swiss-Prot: sp|P15490|VSPA_SOYBN Stem 28 kDa glycoprotein; TrEMBL-Plants: tr|I3SJJ8|I3SJJ8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0372400 LjG1.1_chr3 76274444 76284406 -
2 domain predictions
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LotjaGi5g1v0119100.1
n.a. Acid phosphatase 1; TAIR: AT4G25150.1 HAD superfamily, subfamily IIIB acid phosphatase; Swiss-Prot: sp|P27061|PPA1_SOLLC Acid phosphatase 1; TrEMBL-Plants: tr|C6TD20|C6TD20_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0119100 LjG1.1_chr5 24909269 24914202 -
2 domain predictions
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LotjaGi6g1v0008300.1
n.a. Acid phosphatase 1; TAIR: AT1G04040.1 HAD superfamily, subfamily IIIB acid phosphatase; Swiss-Prot: sp|P27061|PPA1_SOLLC Acid phosphatase 1; TrEMBL-Plants: tr|A0A0B2QYK4|A0A0B2QYK4_GLYSO Acid phosphatase 1; Found in the gene: LotjaGi6g1v0008300 LjG1.1_chr6 1600270 1603218 -
2 domain predictions
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