Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0227500 |
| Transcript ID | LotjaGi2g1v0227500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acid phosphatase 1; TAIR: AT4G29260.1 HAD superfamily, subfamily IIIB acid phosphatase; Swiss-Prot: sp|P27061|PPA1_SOLLC Acid phosphatase 1; TrEMBL-Plants: tr|A0A1J7I355|A0A1J7I355_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0227500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:68431487..68436254) extracted from Lotus japonicus Gifu genome v1.2.
CTTTATCGAAACGTCGTCGTCTTAGATATACGTGGTTGTAACCGCGATTCCGTTTCTCTTTTCATTTTCCACAGAAAAGA AAAAGAAAAAGTCGCCGGAGACCGGTTTCCTTCAAAGGCTTCTCCGTTTTCCGGCGATGGATCCCGCCGTACCGTTCCTG TTCCTGCTGTTACTCTCCGCGACCGGTCACATTTCTTCCGAATCCATCCTCAAGCTCCCGTCGGAAAACGACGACCACTG CGACAGCTGGAGGCTCGCGGTGGAGACGAATAACGCAGGCGTGTGGTATCGCGTGCCGGAGAGTTGCGTGCAGTTCGTGG CTGACTACATGGTCGGAGAGCGGTACGTGAGGGACTCCGAGGTGGTTGGGGATTTCTCGTCGGCGTTCGCCAAGGCTGCG GCGTTGACCGGTGACGGTAGAGATGCGTGGGTGTTCGACATTGATGAGACGCTGCTGTCCAATGTTCCTTACTACAAAGC CGTTGGATTCGGGTAATTGTTGTCATTGGTTGTTTGTTGCATTTACAGCCGTTGGATTTGAATGGTGCTTCTGCAATGGA AGAATGTCACTATCTGAATGCATTTATGAGAAAAGCATTAGTAATAATTGAATAAAGGTTTCATTGTTCATCCTTGATTA TTTAATATGGTGATTCAAATGAATAAATTAAGAATGTGATTGTGAGGGCTGAAAATGAGATATAAGAGTGTTTGATTATC AGCTTGGTTTGTGTTTTAAACTAGTTTATGATTAAATGTTCTAGGGAGAAGTCATTAGTTGAAAAGCTAGCTCATTATCA GCTGCATTTGAGTCAAAATTAACCAAATCTAATTGCACACTAGGGAGCAAAATTTGTAACTAAATCACTGATGAATAACA CTAGATGTAAGTTGTAACTAGCATTCAAGAAAAGCATAGTTTTTTTTCAGTGTAACACTGTATTAAGAGATGGGTTTCTG CTACTATGCTTGTAATAGTTTAGTAATTAGTAGATCATAAGAATTTCTCCATCTAAACATATCATTGGTTGGCTGAAAGA TGATCAAGTATAAGTCTACATGGGAGTTTACTAAATATCAGTGACTCACATCTAGGAAATTTGGGTGATTAATGCATAGA TGCTATTCATGTGGTTGTTATTCAACTTAGCAGGAAGACATCTGTTCTTTGACTTGTTTCTTTCAATTACCAAAATGAGT GAAACACCTAACTAAGAGTTTCCATCTGAAACAGAAAGTAAAAATTGGTAACTTGACTTCAACATTACAACTTTTAAAAT CTAAGATTAACAGCATGGTTGGATTTGTGTTGGACACACTCTACAAAACACGTTAGCGGCGAAGCTCCATAGTGTTGCTT ATGTGTTAACGTGATTTTGAGGTCTAATATGGATACCAATTGTGCAACCAAACATGTACTAACTGGTCTGACCCAAAGTT TATTTGAATTCCTTTGGTTTACTAAGTTCATTGTGGGTGTGTCTTGTTTCAAACTTTGGTCCACAGGGCAACGATCTTCA ATGAGACATCCTTCAATGAATGGGTCAACTTGGCTGAGGCCCCAGCATTGCCTGCTAGCTTGAGTTTATATAAAGAGCTT CAGGGATTGGGCTTCACGATATTTCTCTTGACTGGGAGGAGTGAGCATCAAAGAAATTCCACTGAGGCAAACCTTCTATT TGCAGGGTACAGAAACTGGGAGAAGCTCATCTTAAGGTGCATAAATTGTTGATTTTAAGAAAATACGTGTGTTATGTTTT TGAAACTCACTTGGAGTTCCTTGTTATTGAAACAGAGGCCCTTCTGACCAAGGCAAACCAGCCATTGTTTACAAGTCTGA GAAGAGAGCAGAGCTGGTGAACGCAGGGTACAGGATCCACGGGAACTCTGGGGATCAGTGGAGTGATTTGTGGGGTAATG CAGTGGCCTCACGGTCTTTTAAACTGCCAAACCCAATGTATTATATTTCTTAAAGGAAAATGATTGGTAGACACTCACAT ATTGCAAACATCCAACAGACACAGAGAAAGGAAGAGAAGAGAAGGAAGTAATGATGTGATATATGATGAATGTAATAAGA AGAGAGATGGAGAGAAAAATGAGGTCTCTGCACTATTTGTATGTCTAAGTGTATGTTTGGATACACATTGAAAACCATAG TGAAGCCAAAAACCATGGTAGACAGAAGCAAAAGCTAAGAGAAGTTGCTTTTGCCTACAATGGTTTTGGTTCACCGTGGT TTCCTCCACTGCCAAACATGCACTAAGTCTCATTGTTGTTTCTTAAACATCCAGATATGGCTTCTCCAATTTGTATTCAT TTTCCATGATTGTTTGTTGTAACATCAGTTGATTTTTCTTGGTAAAGTGCTGCCTGTTACAGATAACACTAATTCTGATT TCCGAGCTTTGCCTTGTTTTCAGTTTTCACCAAATAGCACAAAATAACCTGGGCATTTGGTTCTTAGAATAACAGACACT TTGACACTTCTCCTTCAATGAAAGTCTATGCACATTTTTTTCTGTATTATTACCTGTCTGATAATCATTTATCTTGATAT GTTACCTTGCCATAGTGAAAATCTAATGCTATCTCCATTTTGTTTGATTAAAGTAGAGTGTTCTGGCTGATGAATTTTAT TAGTAGTTTGGGCAACCTTGTGTTTTGGCTGTGTAACCGAAAGCACTATAGTGATGTCAAGAGTCATTGTCGAATGCGTG GAATGAAGTTGTTGAAGGTATACTCTGAAGAACCCGTGATAAACTAGTAAACATTAAAGTAAGTAAATCAAACATGTCAC GTGAAACATAAATTAACTCTCTTACAAGGGTCAAGATAGATATTAGATGTTTCAGAAATTGCAAATATGTCTGTTTCAAA ATATATCCATTTCTAAAGCGTGCAGGTCGAAAATAATTACAGACAGACATACTGACTGAATCTATGAAGAATTAAACTAG CAGTGTTTGAATTAAGATTGGTAGCACTAATCAATGGAACAGGCAAGGAACAACCTTTAATTAACTATACTGTAACCATC AAGGAGATGGTGAATTGGAATCAGTTTTCTTAAATTTACTTACAGATAAAGAACCACAAATAACAGGCTTTGGTGTAGGG AGTCTGAGACAACTTAAGCTACCTCCTGGGATCACAGAACACTCAGGTTGAGGTCTTTGCAAATCCCTCCCAGGAATGCA GTTAAGTGAGAAATCAAAACCCACATTCCTAAAGGAAAGTTTTGAGCATTGCTGGCTGAACCCAGAAAAGAAATTGAATG AAACTGTTAGATTTGCAATGCTTCTCAGAGAGCAGATTATATCTGACACCTCCCCAGAAAGCTGATTATGTGCCAAATTC AAGACTTCTATTTCCTCCAGGCAAGACAGTGTGTCTGGCAAATGACCCATGAGTGCATTGAAGCTCACATCCAGAACCTG CATCTCAGTGAAAAGCCCCACTCCTTCAGGAATGCAACCTGTTAACTGGTTATTGAGGAACAGAATCTCCTTTATCTTAG AACCCGTGAAGCCAAAACTTGCTGGTATGCTCCCACTCAACTTGTTGTTCGCTAAATTGATCACAGAGGCAGGGGAGTTG CCCAAACTCTGGGGAATCTCACCTTCAAACTGATTGTTGTTGAGAAAAATTGCATCCAGGTTCTTGTTGAAAAGCTCCTG AGGGATGGACCCTGAGAAGGAGTTGAATCTGAGGTCCAAGTAGATGAGGCTTGGTATGTACAGAGTAACATCAGGGAAAG GACCTGAAAGCTGGTTGTTGCTGAGGTCTAACTCTTCCAGAGACATGAGGTCCTTGAATGTATCTGGAACAGTGCCAGTA AATCTGTTACTGTTGAGGTGGAGAAGAGACATGTCACTGAGTAAAGATAGCTCTTTGACCAGAGTTCCTTTGAGATTTGC ATGGTTGAGATCTATGCCTGCAACAACCATTTCAGCTTGAGAATTTGAGCTGCAGAAGACTCCTTTGTAAGAACACACAT CAGAACCAACCCAGTTAACTAAAATCTTCAGTGGATCATCAGTAATTGCAGATTTCCAGGCCTGAAGAGCTGTGTAAGCT GCATTCACCTTTGACACTGAAGATCCTGAGGGGTTTGGGTTTGGAGTGTTGATCCCTCCACCAACCCAAACCATTCCACC ACTGCCACCACCACCATCACCATCACCATCATTGCCAATACCAAATCCTACACCAACACCGCCTCCGACACCAATGGCAG CTTTTGCTGTGCCTAAATGGAGGACCAGGAGGAGAAAAGCCAGAATCCAGCTCTTCTCCATTTTTAGCTCAAGATACCAG GGAATTGTTAAAGGGTGTGCTTCCAAGTTTGTCCAAAATCCAAATAAGGTTGCTGCATTGAAGAGAGGGAGAGAGAGTGT GGTGGCTAGTGGGGTTGATTAGCCTTGAATGAGGCCTGTTTTATTCACCATTTTCTGTTTAGTTTGGGATGTGAGTTTGG GCCATATTTTTGTACACCCTTCTCTGTATAGATGTTGACTTCTGTTGTAGGAAGTCAGAACAGTGAGGTGAGAACTAATC AGTGATCAATAATTACTACAAACATTTTGGTTTTTATTATAGTAGTGGCTGCAGACCAATGATCTTTCTGGAGAAGCTGT TTTATTCAAAAACCTTACAGAATGTAGATAATGATAGATAAATGCACTCCATCTTATACAAATTAAACTTGCTTTTCCTA TTAAAAAAATGATAATGGTGTGAGGGTACTGTATGCTATCTAGACAAG
CDS sequence (LotjaGi2g1v0227500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCCCGCCGTACCGTTCCTGTTCCTGCTGTTACTCTCCGCGACCGGTCACATTTCTTCCGAATCCATCCTCAAGCT CCCGTCGGAAAACGACGACCACTGCGACAGCTGGAGGCTCGCGGTGGAGACGAATAACGCAGGCGTGTGGTATCGCGTGC CGGAGAGTTGCGTGCAGTTCGTGGCTGACTACATGGTCGGAGAGCGGTACGTGAGGGACTCCGAGGTGGTTGGGGATTTC TCGTCGGCGTTCGCCAAGGCTGCGGCGTTGACCGGTGACGGTAGAGATGCGTGGGTGTTCGACATTGATGAGACGCTGCT GTCCAATGTTCCTTACTACAAAGCCGTTGGATTCGGGGCAACGATCTTCAATGAGACATCCTTCAATGAATGGGTCAACT TGGCTGAGGCCCCAGCATTGCCTGCTAGCTTGAGTTTATATAAAGAGCTTCAGGGATTGGGCTTCACGATATTTCTCTTG ACTGGGAGGAGTGAGCATCAAAGAAATTCCACTGAGGCAAACCTTCTATTTGCAGGGTACAGAAACTGGGAGAAGCTCAT CTTAAGAGGCCCTTCTGACCAAGGCAAACCAGCCATTGTTTACAAGTCTGAGAAGAGAGCAGAGCTGGTGAACGCAGGGT ACAGGATCCACGGGAACTCTGGGGATCAGTGGAGTGATTTGTGGGGTAATGCAGTGGCCTCACGGTCTTTTAAACTGCCA AACCCAATGTATTATATTTCTTAA
Protein sequence (LotjaGi2g1v0227500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDPAVPFLFLLLLSATGHISSESILKLPSENDDHCDSWRLAVETNNAGVWYRVPESCVQFVADYMVGERYVRDSEVVGDF SSAFAKAAALTGDGRDAWVFDIDETLLSNVPYYKAVGFGATIFNETSFNEWVNLAEAPALPASLSLYKELQGLGFTIFLL TGRSEHQRNSTEANLLFAGYRNWEKLILRGPSDQGKPAIVYKSEKRAELVNAGYRIHGNSGDQWSDLWGNAVASRSFKLP NPMYYIS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| PANTHER | 8 | 247 | 240 | 1.2E-106 | – | |
| PIRSF | 11 | 247 | 237 | 2.0E-99 | ||
| Phobius | 16 | 21 | 6 | - | – | |
| Phobius | 22 | 247 | 226 | - | – | |
| TIGRFAM | 29 | 246 | 218 | 2.0E-86 | ||
| Pfam | 30 | 246 | 217 | 2.7E-68 | ||
| Gene3D | 30 | 247 | 218 | 2.7E-81 | ||
| CDD | 61 | 246 | 186 | 3.90566E-99 | – | |
| SUPERFAMILY | 89 | 245 | 157 | 7.91E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Acid phosphatase activity | Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum. |
Expression pattern of LotjaGi2g1v0227500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…