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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR014889
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.439s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0259819.1
n.a. PREDICTED: transcription factor-like protein DPB-like [Glycine max] gi|356497355|ref|XP_003517526.1| chr0 135030262 135036011 -
2 domain predictions
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Lj0g3v0259819.2
n.a. PREDICTED: transcription factor-like protein DPB-like [Glycine max] gi|356497355|ref|XP_003517526.1| chr0 135030427 135036011 -
2 domain predictions
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Lj0g3v0292459.1
n.a. PREDICTED: transcription factor-like protein DPB-like [Cucumis sativus] gi|449438797|ref|XP_004137174.1| chr0 151802601 151806360 -
2 domain predictions
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Lj0g3v0311209.1
n.a. PREDICTED: transcription factor-like protein DPB-like [Cicer arietinum] gi|502144178|ref|XP_004505605.1| chr0 162496363 162498055 +
3 domain predictions
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LotjaGi1g1v0205000.1
n.a. Transcription factor; TAIR: AT5G03415.1 Transcription factor DP; Swiss-Prot: sp|Q9FNY2|DPB_ARATH Transcription factor-like protein DPB; TrEMBL-Plants: tr|A0A151SD62|A0A151SD62_CAJCA Transcription factor Dp-1; Found in the gene: LotjaGi1g1v0205000 LjG1.1_chr1 44306403 44310233 +
4 domain predictions
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LotjaGi1g1v0205100.1
n.a. Transcription factor; TAIR: AT5G03415.1 Transcription factor DP; Swiss-Prot: sp|Q9FNY2|DPB_ARATH Transcription factor-like protein DPB; TrEMBL-Plants: tr|A0A151SD62|A0A151SD62_CAJCA Transcription factor Dp-1; Found in the gene: LotjaGi1g1v0205100 LjG1.1_chr1 44319380 44333436 +
4 domain predictions
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LotjaGi1g1v0205100.2
n.a. Transcription factor; TAIR: AT5G03415.1 Transcription factor DP; Swiss-Prot: sp|Q9FNY2|DPB_ARATH Transcription factor-like protein DPB; TrEMBL-Plants: tr|A0A151SD62|A0A151SD62_CAJCA Transcription factor Dp-1; Found in the gene: LotjaGi1g1v0205100 LjG1.1_chr1 44319438 44333123 +
4 domain predictions
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LotjaGi4g1v0140500.1
n.a. Transcription factor; TAIR: AT5G03415.1 Transcription factor DP; Swiss-Prot: sp|Q9FNY2|DPB_ARATH Transcription factor-like protein DPB; TrEMBL-Plants: tr|A0A151SD62|A0A151SD62_CAJCA Transcription factor Dp-1; Found in the gene: LotjaGi4g1v0140500 LjG1.1_chr4 21225633 21240494 -
4 domain predictions
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LotjaGi4g1v0140500.2
n.a. Transcription factor DP; TAIR: AT5G03415.1 Transcription factor DP; Swiss-Prot: sp|Q9FNY2|DPB_ARATH Transcription factor-like protein DPB; TrEMBL-Plants: tr|A0A151SD62|A0A151SD62_CAJCA Transcription factor Dp-1; Found in the gene: LotjaGi4g1v0140500 LjG1.1_chr4 21227631 21237837 -
4 domain predictions
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