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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR016140
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 177 results. Now displaying 1 of 4 with 50 rows per page. This search has taken 5.870s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0062829.1
n.a. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Theobroma cacao] gi|508704884|gb|EOX96780.1| chr0 21170605 21171919 -
4 domain predictions
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Lj0g3v0062829.2
n.a. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Theobroma cacao] gi|508704884|gb|EOX96780.1| chr0 21170605 21171919 -
4 domain predictions
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Lj0g3v0065389.1
n.a. Seed specific protein Bn15D18B [Medicago truncatula] gi|357474035|ref|XP_003607302.1| chr0 22714753 22715165 -
3 domain predictions
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Lj0g3v0100899.1
n.a. Lipid transfer-like protein VAS [Medicago truncatula] gi|357499123|ref|XP_003619850.1| chr0 42709418 42711943 -
3 domain predictions
 –
Lj0g3v0128239.1
n.a. Non-specific lipid-transfer protein [Medicago truncatula] gi|357506649|ref|XP_003623613.1| chr0 57918654 57919007 -
4 domain predictions
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Lj0g3v0163389.1
n.a. PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like isoform X1 [Cicer arietinum] gi|502115360|ref|XP_004495185.1| chr0 77267746 77268922 +
4 domain predictions
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Lj0g3v0164769.1
n.a. Protease inhibitor/seed storage/LTP family protein [Medicago truncatula] gi|357505755|ref|XP_003623166.1| chr0 78118796 78119814 +
4 domain predictions
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Lj0g3v0166189.1
n.a. PREDICTED: non-specific lipid-transfer protein AP10-like [Vitis vinifera] gi|359488913|ref|XP_002283359.2| chr0 79030835 79031254 -
2 domain predictions
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Lj0g3v0168659.1
n.a. Non-specific lipid-transfer protein [Medicago truncatula] gi|357506649|ref|XP_003623613.1| chr0 80545817 80546224 +
4 domain predictions
 –
Lj0g3v0200419.1
n.a. PREDICTED: non-specific lipid-transfer protein-like [Cicer arietinum] gi|502104473|ref|XP_004492551.1| chr0 98857744 98858753 +
2 domain predictions
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Lj0g3v0200859.1
n.a. protease inhibitor/seed storage/LTP family protein [Arabidopsis thaliana] gi|145332667|ref|NP_001078199.1| chr0 99147384 99150011 -
2 domain predictions
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Lj0g3v0201339.1
n.a. Proline-rich protein [Medicago truncatula] gi|357477499|ref|XP_003609035.1| chr0 99556514 99557704 +
3 domain predictions
 –
Lj0g3v0208039.1
n.a. PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Glycine max] gi|356574517|ref|XP_003555393.1| chr0 104126266 104128512 -
4 domain predictions
 –
Lj0g3v0232609.1
n.a. Non-specific lipid-transfer protein [Medicago truncatula] gi|357451153|ref|XP_003595853.1| chr0 120731025 120732038 +
4 domain predictions
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Lj0g3v0254239.1
n.a. RecName: Full=Non-specific lipid-transfer protein; Short=LTP; Flags: Precursorgi|2632171|emb|CAA05771.1| lipid transfer protein [Cicer arietinum] gi|3914136|sp|O23758.1|NLTP_CICAR chr0 132015690 132015848 -
2 domain predictions
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Lj0g3v0254249.1
n.a. RecName: Full=Non-specific lipid-transfer protein 2; Short=LTP2; Contains: RecName: Full=Non-specific lipid-transfer protein 7; Short=LTP7; Flags: Precursorgi|60735410|gb|AAX35807.1| lipid transfer protein 2 precursor [Lens culinaris] gi|122249721|sp|A0AT29.1|NLTP2_LENCU chr0 132022905 132023539 -
4 domain predictions
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Lj0g3v0256619.1
n.a. Non-specific lipid-transfer protein [Medicago truncatula] gi|357451153|ref|XP_003595853.1| chr0 133223093 133224275 +
4 domain predictions
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Lj0g3v0259709.1
n.a. Proline rich protein [Medicago truncatula] gi|357476913|ref|XP_003608742.1| chr0 134978142 134979336 -
3 domain predictions
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Lj0g3v0265359.1
n.a. PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cicer arietinum] gi|502181574|ref|XP_004516837.1| chr0 137488332 137489725 -
3 domain predictions
 –
Lj0g3v0269519.1
n.a. lipid transfer protein [Gossypium hirsutum] gi|383932358|gb|AFH57276.1| chr0 139632052 139633395 +
3 domain predictions
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Lj0g3v0270959.1
n.a. Non-specific lipid-transfer protein [Medicago truncatula] gi|357462977|ref|XP_003601770.1| chr0 140347164 140349246 -
4 domain predictions
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Lj0g3v0272009.1
n.a. lipid transfer protein precursor [Pisum sativum] gi|7381207|gb|AAF61436.1|AF137353_1 chr0 140952530 140954307 +
3 domain predictions
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Lj0g3v0296809.1
n.a. Lipid transfer-like protein VAS [Medicago truncatula] gi|357476975|ref|XP_003608773.1| chr0 154177961 154178454 +
3 domain predictions
 –
Lj0g3v0296819.1
n.a. PREDICTED: lipid transfer-like protein VAS-like [Glycine max] gi|356514192|ref|XP_003525790.1| chr0 154179227 154181881 +
3 domain predictions
 –
Lj0g3v0299689.1
n.a. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Theobroma cacao] gi|508704389|gb|EOX96285.1| chr0 155701585 155702309 -
3 domain predictions
 –
Lj0g3v0335049.1
n.a. Conglutin [Medicago truncatula] gi|357452737|ref|XP_003596645.1| chr0 175403576 175404029 +
4 domain predictions
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Lj0g3v0346339.1
n.a. 14 kDa proline-rich protein DC2.15 [Medicago truncatula] gi|357476925|ref|XP_003608748.1| chr0 181662072 181662905 +
3 domain predictions
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Lj0g3v0360759.1
n.a. PREDICTED: non-specific lipid-transfer protein AP10-like [Vitis vinifera] gi|359488913|ref|XP_002283359.2| chr0 190007282 190007764 +
3 domain predictions
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Lj1g3v0099450.1
n.a. PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Glycine max] gi|356574410|ref|XP_003555341.1| chr1 940534 942092 -
4 domain predictions
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Lj1g3v0099460.1
n.a. PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Glycine max] gi|356534201|ref|XP_003535646.1| chr1 942509 944294 +
4 domain predictions
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Lj1g3v0116420.1
n.a. PREDICTED: non-specific lipid-transfer protein-like protein At5g64080-like isoform X2 [Cicer arietinum] gi|502159100|ref|XP_004511393.1| chr1 1392036 1393104 -
3 domain predictions
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Lj1g3v0116420.2
n.a. PREDICTED: non-specific lipid-transfer protein-like protein At5g64080-like isoform X2 [Cicer arietinum] gi|502159100|ref|XP_004511393.1| chr1 1392375 1393104 -
3 domain predictions
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Lj1g3v0116440.1
n.a. PREDICTED: non-specific lipid-transfer protein-like protein At5g64080-like isoform X1 [Cicer arietinum] gi|502159097|ref|XP_004511392.1| chr1 1396850 1398261 -
4 domain predictions
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Lj1g3v0116440.2
n.a. PREDICTED: non-specific lipid-transfer protein-like protein At5g64080-like isoform X1 [Cicer arietinum] gi|502159097|ref|XP_004511392.1| chr1 1396850 1399862 -
4 domain predictions
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Lj1g3v0116450.1
n.a. Non-specific lipid-transfer protein [Medicago truncatula] gi|357480991|ref|XP_003610781.1| chr1 1400292 1401768 +
4 domain predictions
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Lj1g3v0116460.1
n.a. Non-specific lipid-transfer protein [Medicago truncatula] gi|357480991|ref|XP_003610781.1| chr1 1400292 1402075 +
4 domain predictions
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Lj1g3v1388130.1
n.a. Seed specific protein Bn15D18B [Medicago truncatula] gi|357474035|ref|XP_003607302.1| chr1 17145502 17145849 -
3 domain predictions
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Lj1g3v1888500.1
n.a. 14 kDa proline-rich protein DC2.15 [Medicago truncatula] gi|357437017|ref|XP_003588784.1| chr1 22567300 22568682 +
3 domain predictions
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Lj1g3v3278890.1
n.a. PREDICTED: probable non-specific lipid-transfer protein AKCS9-like [Glycine max] gi|356573851|ref|XP_003555069.1| chr1 36882941 36883895 +
4 domain predictions
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Lj1g3v3442640.1
n.a. PREDICTED: non-specific lipid-transfer protein-like [Cicer arietinum] gi|502103829|ref|XP_004492374.1| chr1 39749896 39750871 -
4 domain predictions
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Lj1g3v3594930.1
n.a. defective in induced resistance 1 protein [Nicotiana tabacum] gi|328685099|gb|AEB33949.1| chr1 41295050 41296313 -
4 domain predictions
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Lj1g3v4446830.1
n.a. PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Cicer arietinum] gi|502109641|ref|XP_004493692.1| chr1 51919610 51921037 -
4 domain predictions
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Lj1g3v4446840.1
n.a. Non-specific lipid-transfer protein [Medicago truncatula] gi|357440667|ref|XP_003590611.1| chr1 51923121 51924778 +
4 domain predictions
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Lj1g3v5034760.1
n.a. PREDICTED: probable non-specific lipid-transfer protein 1-like [Glycine max] gi|356506061|ref|XP_003521806.1| chr1 61524349 61525054 -
4 domain predictions
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Lj2g3v0435580.1
n.a. PREDICTED: stamen-specific protein FIL1-like [Cicer arietinum] gi|502119376|ref|XP_004496598.1| chr2 6372425 6372833 +
4 domain predictions
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Lj2g3v0704900.1
n.a. PREDICTED: probable non-specific lipid-transfer protein AKCS9-like [Glycine max] gi|356520615|ref|XP_003528957.1| chr2 11285227 11288862 +
4 domain predictions
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Lj2g3v0741940.1
n.a. PREDICTED: non-specific lipid-transfer protein-like protein At5g64080-like [Cicer arietinum] gi|502077668|ref|XP_004485710.1| chr2 11682984 11686953 -
4 domain predictions
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Lj2g3v2002440.1
n.a. Lipid binding protein [Medicago truncatula] gi|357481933|ref|XP_003611252.1| chr2 30335696 30337254 +
3 domain predictions
 –
Lj2g3v2002450.1
n.a. Lipid binding protein [Medicago truncatula] gi|357481933|ref|XP_003611252.1| chr2 30335760 30337506 +
3 domain predictions
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Lj2g3v2538580.1
n.a. MtN5 protein [Medicago truncatula] gi|357494771|ref|XP_003617674.1| chr2 35105883 35106293 -
4 domain predictions
 –