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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3442640 |
| Transcript ID | Lj1g3v3442640.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: non-specific lipid-transfer protein-like [Cicer arietinum] gi|502103829|ref|XP_004492374.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 6 | 6 | – | – | |
| PANTHER | 3 | 120 | 118 | 7.20E-46 | – | |
| PANTHER | 3 | 120 | 118 | 7.20E-46 | – | |
| TMHMM | 7 | 26 | 20 | – | – | |
| Phobius | 7 | 18 | 12 | – | – | |
| Phobius | 19 | 28 | 10 | – | – | |
| Pfam | 25 | 114 | 90 | 5.60E-13 | ||
| Phobius | 29 | 120 | 92 | – | – | |
| SMART | 32 | 114 | 83 | 5.40E-04 | ||
| Gene3D | 40 | 107 | 68 | 4.20E-13 | – | |
| SUPERFAMILY | 41 | 110 | 70 | 7.98E-15 | ||
| CDD | 45 | 105 | 61 | 8.32E-11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj1g3v3442640.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3442640.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.