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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR016969
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.680s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0251589.1
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508708156|gb|EOY00053.1| chr0 130521504 130526520 +
2 domain predictions
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Lj5g3v2179840.1
n.a. Uncharacterized protein isoform 1 [Theobroma cacao] gi|508708156|gb|EOY00053.1| chr5 31331447 31352966 +
2 domain predictions
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LotjaGi2g1v0202300.1
n.a. alpha/beta hydrolase family protein; TAIR: AT1G15060.1 alpha/beta hydrolase family protein; Swiss-Prot: sp|Q63424|S15A2_RAT Solute carrier family 15 member 2; TrEMBL-Plants: tr|A0A0R0J7T4|A0A0R0J7T4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0202300 LjG1.1_chr2 64235343 64240559 +
2 domain predictions
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LotjaGi5g1v0335900.1
n.a. alpha/beta hydrolase family protein; TAIR: AT1G15060.1 alpha/beta hydrolase family protein; Swiss-Prot: sp|Q3T0A0|ABHD1_BOVIN Protein ABHD1; TrEMBL-Plants: tr|K7N313|K7N313_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0335900 LjG1.1_chr5 65299266 65315020 +
2 domain predictions
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LotjaGi5g1v0335900.2
n.a. alpha/beta hydrolase family protein; TAIR: AT1G15060.2 alpha/beta hydrolase family protein; Swiss-Prot: sp|Q3T0A0|ABHD1_BOVIN Protein ABHD1; TrEMBL-Plants: tr|K7N313|K7N313_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0335900 LjG1.1_chr5 65305716 65309131 +
2 domain predictions
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LotjaGi5g1v0335900.3
n.a. alpha/beta hydrolase family protein; TAIR: AT1G15060.1 alpha/beta hydrolase family protein; Swiss-Prot: sp|Q3T0A0|ABHD1_BOVIN Protein ABHD1; TrEMBL-Plants: tr|K7N313|K7N313_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0335900 LjG1.1_chr5 65305716 65310467 +
2 domain predictions
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