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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR017868
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.914s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v2593560.2
n.a. RNA recognition motif-containing protein isoform 2 [Theobroma cacao] gi|508713270|gb|EOY05167.1| chr4 34800899 34806353 -
3 domain predictions
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Lj6g3v1467190.1
n.a. PREDICTED: protein GAMETE EXPRESSED 2-like [Cicer arietinum] gi|502119995|ref|XP_004496812.1| chr6 17229782 17235438 +
3 domain predictions
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LotjaGi4g1v0372200.1
n.a. RNA recognition motif (RRM)-containing protein; TAIR: AT3G23900.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9LRR6|CID9_ARATH Polyadenylate-binding protein-interacting protein 9; TrEMBL-Plants: tr|V7C647|V7C647_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0372200 LjG1.1_chr4 75196678 75205600 -
3 domain predictions
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LotjaGi4g1v0372200.2
n.a. RNA recognition motif (RRM)-containing protein; TAIR: AT3G23900.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9LRR6|CID9_ARATH Polyadenylate-binding protein-interacting protein 9; TrEMBL-Plants: tr|V7C647|V7C647_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0372200 LjG1.1_chr4 75197612 75205588 -
3 domain predictions
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LotjaGi4g1v0372200.3
n.a. RNA recognition motif (RRM)-containing protein; TAIR: AT3G23900.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9LRR6|CID9_ARATH Polyadenylate-binding protein-interacting protein 9; TrEMBL-Plants: tr|V7C647|V7C647_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0372200 LjG1.1_chr4 75198678 75205561 -
3 domain predictions
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LotjaGi6g1v0251800.1
n.a. Gamete expressed 2; TAIR: AT5G49150.5 gamete expressed 2; Swiss-Prot: sp|F4K4R6|GEX2_ARATH Protein GAMETE EXPRESSED 2; TrEMBL-Plants: tr|A0A151SK53|A0A151SK53_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0251800 LjG1.1_chr6 56394680 56401964 +
3 domain predictions
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LotjaGi6g1v0251800.2
n.a. Gamete expressed 2; TAIR: AT5G49150.2 gamete expressed 2; Swiss-Prot: sp|F4K4R6|GEX2_ARATH Protein GAMETE EXPRESSED 2; TrEMBL-Plants: tr|A0A151SK53|A0A151SK53_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0251800 LjG1.1_chr6 56394680 56402766 +
3 domain predictions
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LotjaGi6g1v0251800.3
n.a. Gamete expressed 2; TAIR: AT5G49150.2 gamete expressed 2; Swiss-Prot: sp|F4K4R6|GEX2_ARATH Protein GAMETE EXPRESSED 2; TrEMBL-Plants: tr|A0A151SK53|A0A151SK53_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0251800 LjG1.1_chr6 56395795 56402066 +
3 domain predictions
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