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IPR017868 is a Filamin/ABP280 repeat-like.
<p>The many different actin cross-linking proteins share a common architecture, consisting of a globular actin-binding domain and an extended rod. Whereas their actin-binding domains consist of two calponin homology domains (see [interpro:IPR001715]), their rods fall into three families.</p> <p>The rod domain of the family including the Dictyostelium discoideum (Slime mould) gelation factor (ABP120) and human filamin (ABP280). It is constructed from tandem repeats of a 100-residue motif that is glycine and proline rich [[cite:PUB00003939]]. The gelation factor's rod contains 6 copies of the repeat, whereas filamin has a rod constructed from 24 repeats. The resolution of the 3D structure of rod repeats from the gelation factor has shown that they consist of a β-sandwich, formed by two β-sheets arranged in an immunoglobulin-like fold [[cite:PUB00003939], [cite:PUB00010567]]. The repeat structure is common to the members of the gelation factor/filamin family.</p> <p>This entry represents the entire filamin/ABP280 repeat.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | RNA recognition motif-containing protein isoform 2 [Theobroma cacao] gi|508713270|gb|EOY05167.1| | 23 | ||
| – | PREDICTED: protein GAMETE EXPRESSED 2-like [Cicer arietinum] gi|502119995|ref|XP_004496812.1| | 8 | ||
| – | RNA recognition motif (RRM)-containing protein; TAIR: AT3G23900.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9LRR6|CID9_ARATH Polyadenylate-binding protein-interacting protein 9; TrEMBL-Plants: tr|V7C647|V7C647_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0372200 | 24 | ||
| – | RNA recognition motif (RRM)-containing protein; TAIR: AT3G23900.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9LRR6|CID9_ARATH Polyadenylate-binding protein-interacting protein 9; TrEMBL-Plants: tr|V7C647|V7C647_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0372200 | 24 | ||
| – | RNA recognition motif (RRM)-containing protein; TAIR: AT3G23900.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9LRR6|CID9_ARATH Polyadenylate-binding protein-interacting protein 9; TrEMBL-Plants: tr|V7C647|V7C647_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0372200 | 24 | ||
| – | Gamete expressed 2; TAIR: AT5G49150.5 gamete expressed 2; Swiss-Prot: sp|F4K4R6|GEX2_ARATH Protein GAMETE EXPRESSED 2; TrEMBL-Plants: tr|A0A151SK53|A0A151SK53_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0251800 | 15 | ||
| – | Gamete expressed 2; TAIR: AT5G49150.2 gamete expressed 2; Swiss-Prot: sp|F4K4R6|GEX2_ARATH Protein GAMETE EXPRESSED 2; TrEMBL-Plants: tr|A0A151SK53|A0A151SK53_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0251800 | 15 | ||
| – | Gamete expressed 2; TAIR: AT5G49150.2 gamete expressed 2; Swiss-Prot: sp|F4K4R6|GEX2_ARATH Protein GAMETE EXPRESSED 2; TrEMBL-Plants: tr|A0A151SK53|A0A151SK53_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0251800 | 14 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| TRANSMEMBRANE | Phobius | 1 | 12.50 |