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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0372200 |
| Transcript ID | LotjaGi4g1v0372200.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RNA recognition motif (RRM)-containing protein; TAIR: AT3G23900.1 RNA recognition motif (RRM)-containing protein; Swiss-Prot: sp|Q9LRR6|CID9_ARATH Polyadenylate-binding protein-interacting protein 9; TrEMBL-Plants: tr|V7C647|V7C647_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0372200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75197612..75205588) extracted from Lotus japonicus Gifu genome v1.2.
GTTATTCCTCACCCTCACCCTTTCTCCTATCAGAGAGTCTTCGGAAGGGAAACTAATCTCCAACACCAAACTTAGCCGTC AACACAACAAACCGACAGGTACTACACTTTCCCGGAAAATCACCCAGAAAATCCCCCCCCTCTTTTTCTCGATCTTCACT CTACCTCTAATTTTCATCACGATTTCCTCTTTTCAATTTTCCAAATCTTCAAATTCACCTCCAGATTCTACATATTCTGA TTTCAATTTTGACCTAGGTTTTTTTTTTCCCCCAAATTCTAGGGTTTAGTTTTTATTGAAGTTAATTATTCGATTAGCTT TTTAATCTTTCGATTTGTTTCAAGCTAGGGTTTGATGGCTGATCGGAGTTTGACAGTTGTGAAGCCGGTATGGATGAAGC AAGCGGAGGAGGCGAAGCTGAAGACGGAGGCCGACAAAGCTGCGGCAGCCAAAGCCGCGTTTGAGGCCACATTCAGGGAT TTGGAGAAGGCTCATGAGAAGGGGGGGCCTGCTGTTCAATCGGATAGTGATTCTGATGAATGGGATGAGGATTATGCCAA GAAGAAGCCTATTGGGCCGGTGGATCCGGCGAAGTGTACTGCTGCGGGGACCGGGATAGCCGGCGGGACGGCTTGTGCTC CGTCTTCGTTTTCGGTTGTGACTAAGGATTCGGATGAGAGGAAGGTTTCAAGTGGGGGTGCTTTGATCAAGGTGAAAGTG ACACCGGGATTGGGGGTTGGTGGGTCGGATCAAGAAGGGATTGTCAAGGATATGGGTGATGGAACGTATACTGTTACGTA TGTGGTGCCAAAGAGAGGGAATTATATGGTCAATGTCGAATGCAATGGCAAGCCTATCATGGGTAGTCCATTTCCTGTGT TTTTCAGTGCAGGTAACCATCATTGCTACTAAAATCCTCTGATTTAATGTTTACTTTTACTATAGGTTCTCGATTATATA CGGCTGCAATGTGGTTCTTTTGAGATTGCCTTTAATGTGTATCATTTGGTTTGTGTGGTATATAATTATGAGTAACACAA GGGTCTAGGTCTATTAAAATTAAAATAGAATGAGAAATATCAAAGTTGAAATGAATATTCCCTCTATTTGGGATAGTAAG ATTTGTTGCTATGCTTAAAGTTGTTATTCTTGATATGTGTGTTATGCTGTGTAAATTCGTGTACGTAAAAGAATGTCCTT ATTACTGCACATATATGTGTTTTGACTGGTCATAATCTTCAATTTATTTGATTTGTTTTATCGTAGGTAATAGTAATGGA GGGCTGCTGGGTTTAGCTCCTGCATCTTCATTTCCAAATCTGGTAAATCAAACTATGCCCAACATGCCAAATTACTCTGG GTCTGTTTCAGGGGCATTCCCGGGACTATTGGGAATGATTCCAGGGATTATTACCGGAGCTTCTGGCGGTGCTATTTTAC CAGGAATTGGGGCCTCACTGGGGGAAGTTTGTCGTGATTACCTAAATGGGCGCTGTGCAAAAGTTGATTGTAAGTTGAAT CACCCACCTCATAATTTGCTTATGACTGCCTTAGCTGCAACAACTTCAATGGGAACACTTAGCCAAGCTCCTATGGCGCC TTCTGCTGCTGCGATGGCCGCCGCTCAGGCAATAGTTGCTGCCCAAGCCCTTCAAGCTCATGCAGCTCAGGTGCAAGCTC AGTCAGCTAAAGATTCCACTGGTATGCTATATGCTATTTAATTTTGTTTTTGTAATGTTGGTATGTTTTTTGCCTAGTTC TGAACTCGTATGTGATGAATGCTTTCTCTCCTTGATTTCACATTATTTTTTGTAGTGACTTTATTGACTTTCTTTTTTTA TTTGTTGTCTTTTTACTATTTCCTAATTTTTTCTTACAACTAATTTTGCTACAACAATCAGGTTCACCTGAAAAAACTAA TAAAGAGGATGCATTGAAGAAAACCCTTCAAGTTAGCAATCTAAGTCCCGTTCTCACTGTGGAACAGCTAAAACAACTCT TTGCTTTCTGTGGCACTGTTGTTGATTGTACAATCACTGAGTCAAAGCATTTTGCATATATAGAATACTCGAAACCTAAA GAGGCAACTGCTGCTTTGGCATTAAACAACATTGATGTTGGGGGGCGCCCTTTAAATGTTGAAATGGCAAAATCACTTCC GCCGAAACCATCTGTTGTGAATTCTTCACATGCTTCATCCTCTCTTCCTTTAATGATGCAGCAAGCTGTTGCAATGCAAC AGCAGCAATTCCAGCAAGCACTGCTTATGCAACAAACTATGACTGCACAGCAGGCTGCTAACCGAGCTGCAACCATGAAA TCTGCCACAGACTTAGCAGCAGCACGAGCTGCAGAAATAAGTAAGAAATTGAATCCTGATGGACTTGTGATTGAAGAAAA AGAGACAAAACAGAAATCCAGGTTTATCTTTTATGTCACTCTTTTTTATGATAATTTATTCTATTGGTGCCTCTTCTCTA TTTTTTTTAAAAAAATTAATTGTCGTAAGTGTTCGATATTTATTTATTTGTTTTTGCTAGCATGCCCTTCCTAGAAAATC TAGGAATTATGGATTTGTATGATTTAATGCTGGAAATAACTTTGATGTAACAAACTGAGCAAAGAGGCTTTAAATATGTG TATGCATAAGGTTGACCAAAAAAATGTATGTATAAGGTTGCTCACCCTTACTTGTGGGCAAAAAGGAGACTTTTCATGAG TGAAGTTATATACAATTGGATATGAAATTCAGTTAGACTACTTAATCAAGCTCATGACCTAGACTGAACTATTGATAAGA TTATTTTAGATTTCAGTGCCGAGGTTGAACTTTTTAGCCAAATGAAGTTTCTTTCTTTTCTAGCTAGAAATAGTAGGGTT AAAAGAAGGCTGCCAGCTTAATATAGGTAAGAGCTGGCCTCAATGAATTATTTCTATTTAGAATATACAGGTGTCTGCTG TCGAAGAAAGGACATTGTTGGTGGCCTTGCTGTTGGCAAGTTTATCATCAATCATGCTTTATTGTCAAATAAACTGTGGT GACAAACTTATGTATCTTGTTCTTTCTTTATTCTTTGTATCCTTTATCATAAAACCATATTTTTCTTTACATGCTCTCTC TCTTAATCTATATTTAATTTCCATATGTAGATCACCTTCTCCCCCTCGTGGAAGATCTCAATCAAAGTCGAGATCTCCTA TCAATTACAGGAGAAGGAGGAAGTCTCGTTCCTATTCACCTGCTCCCCATTTTAGGGATCGGAGGTCCAGGTCACCATTG AGGTTGCGCCATCACTCGGGCTATGAAAGGGGTCGGAGGTCCTTTAGAGACACCAGGGAACATAGTGATAGGTGGTATAG AAGACGAGATTCAGATAGATTTCTAGATCATCATTCATCTGCTTCAAGAAGACATAGAAGTAGGAGTGCGAGCCCCTATA CACGGAAATCATCTGTTTCTCCGAAACGTCACAGGAAAAGTTCACCTCATAGAGGAAGAAAACAGTCACGTGCTGATTCT GGCTCTCCAAGTCATCGCAGAGGAAGTAGGTCTTCTCCAAAGATTGATGAAAAAAAACTACGAAACAGAAGGGACTCGAG GTCTAGTTCTTCGGATGATAAGCCTAACTCCTTCAACAAAGATGAAGAAATCTTGCAGGAAAAGTCTAAACACAGAGAGA GAAAGCGGTCCAGGTCAGTATCTGTGGATGAGAAGCCTCAGAGAAGAAGCCGATCATCCCCAAGAAAAGTGGATGAAAGC GGATCCAGGCACAAGAAGCGGTCCAGGTCAAAATCTGTGGAGGATAAGCACAACTTCCCTGAGAAATTGGAGGAAAACAG AATCCGAAAGTCAAGGCATAATGACAAAAGGCACTCCAGATCAAGATCTACAGAAAGTAGGGATCAAACTGATGCTAGAG AGGATGAAAGAAAATATGGAAAGTCAAAACATCGTGATAGTAAAAGGACCAGATCCAAATCTGTTGAAGGGAAGCATCGT TCCAAAGATAAATCAGGTGAAGTAAAAGATAAGAAATCAAAGCATCGTGATAGAAGGCGTTCAAGGTCAGTATCATTAGA AGGTGATCATGACATAGGAGGCACTTCATCCCGTAAAAATTTGGATGAGAGCAATTTTGAACGCAGACGATTGAGGTCAG GCAGGCATCAATCCAGTGATAAATATGGAAATGGAGATGTAAGATCAGAACATCAAGAGAAAATCCTGTCTAAATTGAAA TCAGAACATCATGATGGGAGTGGGCCCTCTACAAGAAGTTCCAAGGAGTATGAATCAACTAGTATAACAAAATATGACTC TGGATCTGTAGAAGTTAAGCATCAGTCAAGTGATGGAGAAAATGCTTCTAGTGTAGAGAATTCAAAACATCTTGAAGATG CCATACAGGAACCAATTATAAACATGAAGGACTCAACAAACCTGAATGATAATGGGATGTTGAATTCAGTGAATGAGAAC TACAAGTCAGAAAGGTCAACTGAAAATGCAGGAGCTGATGAAAATCCAGGTATGACTTTTCCTGTTATAAAACGTTAACA TCAATTATGTTAGCTTAAATTCTTCAAAATCTGACAATATTCTTTGATACAGGTTGGAAACGTGGGGAGGAAGTGGAAAA TGGGAAATACTAAGAAAACTCTCCTTGGTAATAGCTAATGGCCTTATATGGAATACATTTTGTTTATGCACTCATAGTGA TCACTAAAGCTTAGTTGCTTTTTGTGCTTTGCAGGAGTGGGAATCTAAATGATTTCAAAGTTTCTACCTGACAACCGACA ATCCTAACAATTTAACCATGAGTATTCATTTCTGTTTTTTTTTTTTAATTTCAAATCAGAAGTACTTTAGAGGATAATCG AACTTCGGTGCTTATAAATGCTGATCAGAAAATCTTGTCACCCAAGGCTGATAGGAGTTCTTGTCAATGATCTTATCACG AAAGCATTGCGCAGGTCATGGTTTTGTCTGCGTTTGAAGATTCTTACACCGTCAATGATTGAGATAAGAGCATATTCTAA TTAAGGACTAAGGATTCTCATTGAGGTTCCTGAACCAGTTCACTACAAGGAATAGACTGTTTCCTCTTAGAAGCGTGATT CTCGGAGGATGTCTTTGACTGGGTTCTCGGAATATTCTCTGTTGGTTTATGAACATCTTCAATTGTTTATTTCTCTTTGC AGGTCGGGTTGGAAAAAGATCAGATGTAGATTCCTACAGCTGTTGATGTGGTTTAAGGTTTCAAGAAGTGTCCTGCTTTT GTCATGATCAACCATGCAGCACTTGTATCATGCTGCTTTTACTGCTTGATTGATGTATGTTGGAATGTTATTTTAAGTAT ACTATTCTTCTTATTAAAGGTATTGCACTCTACTATATTTGGATCTTCATATTTATTTGAACATTTATGGAATCTGAATA TCTTTGGTTTCTAGTCCCTCAGATATTGTCATGGTGTGGAGGGAGAAACCCTTTTAGCCTGTGTCCTGATGATATGCATC TAAAACTTTTTTCTCTAAGGGTATAAATAATGTGTAAACTGAACCTTCGAGTGATGTATTAGTTCATCTCCTCTTGTTAC TTTGTGTCATATCTAGATTTATACCCTTCAGGGAATTTTGATATTATGATCATGTTTAGTTGCAAGCCACATTCTTGGAT GTGGCCAACCATAGGTTCCGTTTGATTCACTCATGTTTTGTGGTATGGTGGGCATGTTATACCCAAAACAAATGCAGGTT ATTGACTTTGAAATCTATTGGAGCTTTGAGCTACAGTTTTCTTGGGTTGATTTTCTCTTGTATAAATAAAGGTATGCAGT CAGATTCTGATGCTCTATGGTTCAGAGCATATTTTCCCCCTATCAAGTGTTAAGTGATATGGGAGATGTATTATGTATGA GTGTGTTTGCTCTATGTACTGTTTGCCAATATTTTTTACCATCATCATCTGGTGTCTTATATTGTCCTGTATTTTTTCAT TTTCTTTTTTTCTCTTTTTTTTTCCTCTTTTTTCCCTTCCTTTTTCCTTTTTTTTCCTCCCAAGAAATTGTCATGGCTAG GTAAAGCTTCTATATAAGGTCAACTGAGATCCTGGATGTTGCTGCAATGAGTTACGTCTTTGTTCCATTTGAGCAATTGG CTGACTTACAATTTATTCTTAAGTTAATGCTGAAATGCAAATGATTTCAACAGGTAATTCTCTATGAAACTATTGAGTTG TTCCATTATTTGAGTAGGATCTTCAGTTGTATGTGTAGTTGTCTCTGTATGAACTTGAATCATCTCAGCCTTGTCTGTGG TTAATTTAGTTTTTACGTTTCCTTCTTATTCACATTGATCATATTCCACTAATTACAATCATATGCAGATTGACTGGTTT TCAGTGGTCATCTCAATGTTGTGTCATGAGATTTTTTGATGATTTGATATGATGTCACGTATATTGTGGTTTTGAAAATG AGGTTGTTTCTAATTGGTGCTGGAAAACTTTTTGGTTTGTCCTTCCTTTTGAGGAAATATGGGATTATTTTTCTTGTGAT TGTGAATTACACCTGAAAGTTTCCCTCCATCTTTTTTTGGTTCTTTTTTCACTTCTGTTTCTGCTCTGCTTCTTCCCCCT CTCTCTCTTTTCTGGTTAGGTTAAGCATTGGGTATGATGATCTCATGAGCAGCTGCAAAATCTCTTCACCAGATGATTGT GTGAAGCTTGTTCTTAGAAGTTGTTTGTGTATTAGTTTTCTTATTTTTTAGGGTTAAATTTTCTAATGCTGTCTCTGCAT CACCTGGTCTAGTCACTGTTAGTTGCCTGTCAATTTTATGCCAAGTTGGCCACTTAGGGTAGAGGGCATTATGCTTTACC ATAGGTGTTTGTTCTTAGTGCTGCTTAGTATAATGAAAGAAAAGTAAATTATATTTATGAGGTGTGGGCTCAAAATTGGG CACTACTTTTAGTCTACTGTCCGTATATCAAGCTCTCAACCTTTAAAGGGGTGGAGTTGAGTAGATCATTTAAAACATCC AAAACTGCAATTCTCTAAAATTTGGTTCATTTAAATAGAGGTATATACCTTGAAATTCATAAGATTGTATGTCAATCAAG GTTGGTTCTCATGGAGTATTTTAGTCTCCGAACCTGTTTATATGCTTGTTGCTGAGCATGTAAATAGAAAACCGTCATTA AACTTTATTGCTTCATGAGGCGTAGAAGCAAGTTTAAAACTTCGGTTTTATATTTTGCAGTACTAAGTTTATAAAGGACC ATCTGTAAATGAGCATTAAAATTGAATTTCCATACATGGTATTTTGATGCACGAATTCCTTTAGCTACGGTTAGTGGTTT TATGTTAAAGAAATTGGTGCACGTTCATTCAATTTCTTCAATTAGCCAAACGTTTCCTCTACTGCTCTACGTATCCTTGT TTGAGGCTAGGTCTTAATTGCGCTGTGAATGCTAATTTTAAGACCCAAAGCTACATCAGAAAATCTGCTTGCGGTATGTA GATTGTCTGATACAGAATGAAAATCAATGAAACCAATCTCTTCGTACCAGTCAAGTGATTAGTGCATGTTAGGAAAGCTG CTCAATAATCGCTTGTTTCCACAATTGCGTGAAAATGTAATGAGAATGAGGGAACTGCCATACCTGAATGAGCTTTTGAC AAATACTTTACCGATTAGTGCGTGTTAGGAAAGTTGCTCTATAATAACGTGTCCACAATTGTGTAAAATGAAGTGAGAAA TAATTGCTTCTTGGCCATGTTAAGCGATTGTCACTGAATAATGTTGATTAAATGTGTTCTTAGCATGTGGAAAAATCATG TTAAACGAGAAGCTATTCTTTGTAATTTTTATGGGTTGAACGTGCCTTGGATTATCTGTAGCTTGCCCAACCCAAACGGG TTGATTTTTCATGATTCTTTTATTGATTATTCATAGTTAATTTAATTTCATAATATC
CDS sequence (LotjaGi4g1v0372200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGATCGGAGTTTGACAGTTGTGAAGCCGGTATGGATGAAGCAAGCGGAGGAGGCGAAGCTGAAGACGGAGGCCGA CAAAGCTGCGGCAGCCAAAGCCGCGTTTGAGGCCACATTCAGGGATTTGGAGAAGGCTCATGAGAAGGGGGGGCCTGCTG TTCAATCGGATAGTGATTCTGATGAATGGGATGAGGATTATGCCAAGAAGAAGCCTATTGGGCCGGTGGATCCGGCGAAG TGTACTGCTGCGGGGACCGGGATAGCCGGCGGGACGGCTTGTGCTCCGTCTTCGTTTTCGGTTGTGACTAAGGATTCGGA TGAGAGGAAGGTTTCAAGTGGGGGTGCTTTGATCAAGGTGAAAGTGACACCGGGATTGGGGGTTGGTGGGTCGGATCAAG AAGGGATTGTCAAGGATATGGGTGATGGAACGTATACTGTTACGTATGTGGTGCCAAAGAGAGGGAATTATATGGTCAAT GTCGAATGCAATGGCAAGCCTATCATGGGTAGTCCATTTCCTGTGTTTTTCAGTGCAGGTAATAGTAATGGAGGGCTGCT GGGTTTAGCTCCTGCATCTTCATTTCCAAATCTGGTAAATCAAACTATGCCCAACATGCCAAATTACTCTGGGTCTGTTT CAGGGGCATTCCCGGGACTATTGGGAATGATTCCAGGGATTATTACCGGAGCTTCTGGCGGTGCTATTTTACCAGGAATT GGGGCCTCACTGGGGGAAGTTTGTCGTGATTACCTAAATGGGCGCTGTGCAAAAGTTGATTGTAAGTTGAATCACCCACC TCATAATTTGCTTATGACTGCCTTAGCTGCAACAACTTCAATGGGAACACTTAGCCAAGCTCCTATGGCGCCTTCTGCTG CTGCGATGGCCGCCGCTCAGGCAATAGTTGCTGCCCAAGCCCTTCAAGCTCATGCAGCTCAGGTGCAAGCTCAGTCAGCT AAAGATTCCACTGGTTCACCTGAAAAAACTAATAAAGAGGATGCATTGAAGAAAACCCTTCAAGTTAGCAATCTAAGTCC CGTTCTCACTGTGGAACAGCTAAAACAACTCTTTGCTTTCTGTGGCACTGTTGTTGATTGTACAATCACTGAGTCAAAGC ATTTTGCATATATAGAATACTCGAAACCTAAAGAGGCAACTGCTGCTTTGGCATTAAACAACATTGATGTTGGGGGGCGC CCTTTAAATGTTGAAATGGCAAAATCACTTCCGCCGAAACCATCTGTTGTGAATTCTTCACATGCTTCATCCTCTCTTCC TTTAATGATGCAGCAAGCTGTTGCAATGCAACAGCAGCAATTCCAGCAAGCACTGCTTATGCAACAAACTATGACTGCAC AGCAGGCTGCTAACCGAGCTGCAACCATGAAATCTGCCACAGACTTAGCAGCAGCACGAGCTGCAGAAATAAGTAAGAAA TTGAATCCTGATGGACTTGTGATTGAAGAAAAAGAGACAAAACAGAAATCCAGATCACCTTCTCCCCCTCGTGGAAGATC TCAATCAAAGTCGAGATCTCCTATCAATTACAGGAGAAGGAGGAAGTCTCGTTCCTATTCACCTGCTCCCCATTTTAGGG ATCGGAGGTCCAGGTCACCATTGAGGTTGCGCCATCACTCGGGCTATGAAAGGGGTCGGAGGTCCTTTAGAGACACCAGG GAACATAGTGATAGGTGGTATAGAAGACGAGATTCAGATAGATTTCTAGATCATCATTCATCTGCTTCAAGAAGACATAG AAGTAGGAGTGCGAGCCCCTATACACGGAAATCATCTGTTTCTCCGAAACGTCACAGGAAAAGTTCACCTCATAGAGGAA GAAAACAGTCACGTGCTGATTCTGGCTCTCCAAGTCATCGCAGAGGAAGTAGGTCTTCTCCAAAGATTGATGAAAAAAAA CTACGAAACAGAAGGGACTCGAGGTCTAGTTCTTCGGATGATAAGCCTAACTCCTTCAACAAAGATGAAGAAATCTTGCA GGAAAAGTCTAAACACAGAGAGAGAAAGCGGTCCAGGTCAGTATCTGTGGATGAGAAGCCTCAGAGAAGAAGCCGATCAT CCCCAAGAAAAGTGGATGAAAGCGGATCCAGGCACAAGAAGCGGTCCAGGTCAAAATCTGTGGAGGATAAGCACAACTTC CCTGAGAAATTGGAGGAAAACAGAATCCGAAAGTCAAGGCATAATGACAAAAGGCACTCCAGATCAAGATCTACAGAAAG TAGGGATCAAACTGATGCTAGAGAGGATGAAAGAAAATATGGAAAGTCAAAACATCGTGATAGTAAAAGGACCAGATCCA AATCTGTTGAAGGGAAGCATCGTTCCAAAGATAAATCAGGTGAAGTAAAAGATAAGAAATCAAAGCATCGTGATAGAAGG CGTTCAAGGTCAGTATCATTAGAAGGTGATCATGACATAGGAGGCACTTCATCCCGTAAAAATTTGGATGAGAGCAATTT TGAACGCAGACGATTGAGGTCAGGCAGGCATCAATCCAGTGATAAATATGGAAATGGAGATGTAAGATCAGAACATCAAG AGAAAATCCTGTCTAAATTGAAATCAGAACATCATGATGGGAGTGGGCCCTCTACAAGAAGTTCCAAGGAGTATGAATCA ACTAGTATAACAAAATATGACTCTGGATCTGTAGAAGTTAAGCATCAGTCAAGTGATGGAGAAAATGCTTCTAGTGTAGA GAATTCAAAACATCTTGAAGATGCCATACAGGAACCAATTATAAACATGAAGGACTCAACAAACCTGAATGATAATGGGA TGTTGAATTCAGTGAATGAGAACTACAAGTCAGAAAGGTCAACTGAAAATGCAGGAGCTGATGAAAATCCAGGTTGGAAA CGTGGGGAGGAAGTGGAAAATGGGAAATACTAA
Protein sequence (LotjaGi4g1v0372200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADRSLTVVKPVWMKQAEEAKLKTEADKAAAAKAAFEATFRDLEKAHEKGGPAVQSDSDSDEWDEDYAKKKPIGPVDPAK CTAAGTGIAGGTACAPSSFSVVTKDSDERKVSSGGALIKVKVTPGLGVGGSDQEGIVKDMGDGTYTVTYVVPKRGNYMVN VECNGKPIMGSPFPVFFSAGNSNGGLLGLAPASSFPNLVNQTMPNMPNYSGSVSGAFPGLLGMIPGIITGASGGAILPGI GASLGEVCRDYLNGRCAKVDCKLNHPPHNLLMTALAATTSMGTLSQAPMAPSAAAMAAAQAIVAAQALQAHAAQVQAQSA KDSTGSPEKTNKEDALKKTLQVSNLSPVLTVEQLKQLFAFCGTVVDCTITESKHFAYIEYSKPKEATAALALNNIDVGGR PLNVEMAKSLPPKPSVVNSSHASSSLPLMMQQAVAMQQQQFQQALLMQQTMTAQQAANRAATMKSATDLAAARAAEISKK LNPDGLVIEEKETKQKSRSPSPPRGRSQSKSRSPINYRRRRKSRSYSPAPHFRDRRSRSPLRLRHHSGYERGRRSFRDTR EHSDRWYRRRDSDRFLDHHSSASRRHRSRSASPYTRKSSVSPKRHRKSSPHRGRKQSRADSGSPSHRRGSRSSPKIDEKK LRNRRDSRSSSSDDKPNSFNKDEEILQEKSKHRERKRSRSVSVDEKPQRRSRSSPRKVDESGSRHKKRSRSKSVEDKHNF PEKLEENRIRKSRHNDKRHSRSRSTESRDQTDAREDERKYGKSKHRDSKRTRSKSVEGKHRSKDKSGEVKDKKSKHRDRR RSRSVSLEGDHDIGGTSSRKNLDESNFERRRLRSGRHQSSDKYGNGDVRSEHQEKILSKLKSEHHDGSGPSTRSSKEYES TSITKYDSGSVEVKHQSSDGENASSVENSKHLEDAIQEPIINMKDSTNLNDNGMLNSVNENYKSERSTENAGADENPGWK RGEEVENGKY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | 14 | 34 | 21 | - | – | |
| PANTHER | 17 | 687 | 671 | 1.2E-288 | – | |
| PANTHER | 17 | 687 | 671 | 1.2E-288 | – | |
| MobiDBLite | 44 | 72 | 29 | - | – | |
| ProSiteProfiles | 73 | 177 | 105 | 21.568 | ||
| Pfam | 75 | 173 | 99 | 4.4E-19 | ||
| SUPERFAMILY | 75 | 175 | 101 | 9.34E-22 | ||
| Gene3D | 75 | 183 | 109 | 9.5E-26 | ||
| SMART | 77 | 180 | 104 | 3.9E-25 | ||
| ProSiteProfiles | 247 | 268 | 22 | 9.498 | ||
| Gene3D | 298 | 419 | 122 | 2.5E-20 | ||
| SUPERFAMILY | 337 | 418 | 82 | 3.26E-19 | ||
| ProSiteProfiles | 338 | 409 | 72 | 14.112 | ||
| SMART | 339 | 405 | 67 | 5.4E-15 | ||
| CDD | 340 | 405 | 66 | 4.6003E-15 | – | |
| Pfam | 342 | 402 | 61 | 1.6E-11 | ||
| MobiDBLite | 483 | 499 | 17 | - | – | |
| MobiDBLite | 483 | 563 | 81 | - | – | |
| MobiDBLite | 543 | 563 | 21 | - | – | |
| MobiDBLite | 577 | 970 | 394 | - | – | |
| MobiDBLite | 599 | 613 | 15 | - | – | |
| MobiDBLite | 614 | 706 | 93 | - | – | |
| MobiDBLite | 713 | 732 | 20 | - | – | |
| MobiDBLite | 739 | 763 | 25 | - | – | |
| MobiDBLite | 770 | 793 | 24 | - | – | |
| MobiDBLite | 801 | 872 | 72 | - | – | |
| MobiDBLite | 873 | 905 | 33 | - | – | |
| MobiDBLite | 921 | 946 | 26 | - | – | |
| MobiDBLite | 956 | 970 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi4g1v0372200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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