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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018226
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.982s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4994140.1
n.a. PREDICTED: pro-hevein [Glycine max] gi|356573103|ref|XP_003554704.1| chr1 60652541 60654196 +
2 domain predictions
2 GO terms
Lj5g3v1412690.1
n.a. PREDICTED: pathogenesis-related protein PR-4A-like isoform X1 [Cicer arietinum] gi|502117387|ref|XP_004495803.1| chr5 20887779 20888450 -
2 domain predictions
2 GO terms
LotjaGi1g1v0782000.1
n.a. Pathogenesis-related protein PR-4; TAIR: AT3G04720.1 pathogenesis-related 4; Swiss-Prot: sp|P09762|WIN2_SOLTU Wound-induced protein WIN2; TrEMBL-Plants: tr|I3T7R4|I3T7R4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0782000 LjG1.1_chr1 135517191 135519462 +
2 domain predictions
2 GO terms
LotjaGi1g1v0782200.1
n.a. Pathogenesis-related protein PR-4; TAIR: AT3G04720.1 pathogenesis-related 4; Swiss-Prot: sp|P32045|PRP2_SOLLC Pathogenesis-related protein P2; TrEMBL-Plants: tr|C6T2R0|C6T2R0_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0782200 LjG1.1_chr1 135526494 135527914 +
3 domain predictions
2 GO terms
LotjaGi5g1v0212300.1
n.a. Pathogenesis-related protein PR-4; TAIR: AT3G04720.1 pathogenesis-related 4; Swiss-Prot: sp|P09761|WIN1_SOLTU Wound-induced protein WIN1; TrEMBL-Plants: tr|A0A072VNL8|A0A072VNL8_MEDTR Chitinase / Hevein / PR-4 / Wheatwin2; Found in the gene: LotjaGi5g1v0212300 LjG1.1_chr5 51713739 51714850 -
2 domain predictions
2 GO terms