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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018494
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.043s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0224089.1
n.a. PREDICTED: oxysterol-binding protein-related protein 3A-like [Cicer arietinum] gi|502103773|ref|XP_004492360.1| chr0 115665671 115668942 +
2 domain predictions
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Lj1g3v3443900.1
n.a. PREDICTED: oxysterol-binding protein-related protein 3A-like [Cicer arietinum] gi|502103773|ref|XP_004492360.1| chr1 39862378 39863149 -
2 domain predictions
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Lj3g3v3211090.1
n.a. PREDICTED: oxysterol-binding protein-related protein 3C-like [Glycine max] gi|356542429|ref|XP_003539669.1| chr3 39586486 39590338 +
2 domain predictions
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Lj3g3v3211090.2
n.a. PREDICTED: oxysterol-binding protein-related protein 3C-like [Glycine max] gi|356558019|ref|XP_003547306.1| chr3 39586632 39590338 +
2 domain predictions
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Lj4g3v2133960.1
n.a. PREDICTED: oxysterol-binding protein-related protein 4B-like [Glycine max] gi|356564829|ref|XP_003550650.1| chr4 29299097 29307090 -
2 domain predictions
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Lj6g3v1334370.1
n.a. PREDICTED: oxysterol-binding protein-related protein 4B-like [Cicer arietinum] gi|502085699|ref|XP_004487979.1| chr6 15988263 15994360 +
2 domain predictions
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LotjaGi1g1v0578700.1
n.a. Oxysterol-binding family protein; TAIR: AT5G02100.1 Oxysterol-binding family protein; Swiss-Prot: sp|Q9LZM1|ORP3A_ARATH Oxysterol-binding protein-related protein 3A; TrEMBL-Plants: tr|A0A0L9U6I5|A0A0L9U6I5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0578700 LjG1.1_chr1 111827011 111831524 -
2 domain predictions
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LotjaGi1g1v0578700.2
n.a. Oxysterol-binding family protein; TAIR: AT5G02100.1 Oxysterol-binding family protein; Swiss-Prot: sp|Q9LZM1|ORP3A_ARATH Oxysterol-binding protein-related protein 3A; TrEMBL-Plants: tr|A0A072UAQ5|A0A072UAQ5_MEDTR OSBP(Oxysterol-binding protein)-related protein 4C; Found in the gene: LotjaGi1g1v0578700 LjG1.1_chr1 111827760 111830843 -
2 domain predictions
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LotjaGi1g1v0578700.3
n.a. Oxysterol-binding family protein; TAIR: AT5G02100.1 Oxysterol-binding family protein; Swiss-Prot: sp|Q9LZM1|ORP3A_ARATH Oxysterol-binding protein-related protein 3A; TrEMBL-Plants: tr|A0A0L9U6I5|A0A0L9U6I5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0578700 LjG1.1_chr1 111827760 111831339 -
2 domain predictions
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LotjaGi2g1v0374300.1
n.a. Oxysterol-binding protein-related protein; TAIR: AT5G59420.1 OSBP(oxysterol binding protein)-related protein 3C; Swiss-Prot: sp|Q93Y40|ORP3C_ARATH Oxysterol-binding protein-related protein 3C; TrEMBL-Plants: tr|A0A0S3SD83|A0A0S3SD83_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0374300 LjG1.1_chr2 87107166 87111347 +
2 domain predictions
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LotjaGi2g1v0374300.2
n.a. Oxysterol-binding protein-related protein; TAIR: AT5G59420.1 OSBP(oxysterol binding protein)-related protein 3C; Swiss-Prot: sp|Q93Y40|ORP3C_ARATH Oxysterol-binding protein-related protein 3C; TrEMBL-Plants: tr|A0A1J7HG34|A0A1J7HG34_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0374300 LjG1.1_chr2 87107366 87110034 +
2 domain predictions
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LotjaGi6g1v0236500.1
n.a. Oxysterol-binding protein; TAIR: AT5G57240.1 OSBP(oxysterol binding protein)-related protein 4C; Swiss-Prot: sp|Q9LVD4|ORP4C_ARATH Oxysterol-binding protein-related protein 4C; TrEMBL-Plants: tr|Q2HUM2|Q2HUM2_MEDTR OSBP(Oxysterol-binding protein)-related protein 4C; Found in the gene: LotjaGi6g1v0236500 LjG1.1_chr6 54648214 54654399 +
2 domain predictions
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LotjaGi6g1v0236500.2
n.a. Oxysterol-binding protein; TAIR: AT5G57240.1 OSBP(oxysterol binding protein)-related protein 4C; Swiss-Prot: sp|Q9LVD4|ORP4C_ARATH Oxysterol-binding protein-related protein 4C; TrEMBL-Plants: tr|K7MBT5|K7MBT5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0236500 LjG1.1_chr6 54648214 54654399 +
2 domain predictions
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