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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018848
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We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.832s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0223599.1
n.a. PREDICTED: histone-lysine N-methyltransferase SUVR4-like [Glycine max] gi|356533657|ref|XP_003535377.1| chr0 115335715 115348025 -
2 domain predictions
1 GO term
Lj0g3v0223599.2
n.a. PREDICTED: histone-lysine N-methyltransferase SUVR4-like [Glycine max] gi|356533657|ref|XP_003535377.1| chr0 115335715 115344565 -
2 domain predictions
1 GO term
Lj0g3v0265609.1
n.a. Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Medicago truncatula] gi|357505017|ref|XP_003622797.1| chr0 137616300 137624390 +
2 domain predictions
1 GO term
Lj0g3v0325949.1
n.a. PREDICTED: histone-lysine N-methyltransferase SUVR1-like [Glycine max] gi|356536852|ref|XP_003536947.1| chr0 170351302 170359067 +
2 domain predictions
1 GO term
Lj1g3v4516130.1
n.a. PREDICTED: histone-lysine N-methyltransferase SUVR4-like isoform X1 [Cicer arietinum] gi|502110178|ref|XP_004493818.1| chr1 53212741 53221564 -
2 domain predictions
1 GO term
Lj5g3v1426460.1
n.a. Uncharacterized protein TCM_042566 [Theobroma cacao] gi|508725959|gb|EOY17856.1| chr5 21169777 21173603 +
2 domain predictions
1 GO term
LotjaGi1g1v0078800.1
n.a. Histone-lysine N-methyltransferase; TAIR: AT2G40020.2 Nucleolar histone methyltransferase-related protein; Swiss-Prot: sp|Q946J2|SUVR1_ARATH Probable inactive histone-lysine N-methyltransferase SUVR1; TrEMBL-Plants: tr|A0A0L9UWG4|A0A0L9UWG4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0078800 LjG1.1_chr1 11365226 11368091 -
2 domain predictions
1 GO term
LotjaGi1g1v0704900.1
n.a. Histone-lysine N-methyltransferase; TAIR: AT3G04380.1 SET-domain containing protein lysine methyltransferase family protein; Swiss-Prot: sp|Q8W595|SUVR4_ARATH Histone-lysine N-methyltransferase SUVR4; TrEMBL-Plants: tr|K7MYR2|K7MYR2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0704900 LjG1.1_chr1 127307344 127316472 +
2 domain predictions
1 GO term
LotjaGi1g1v0704900.2
n.a. Histone-lysine N-methyltransferase; TAIR: AT3G04380.1 SET-domain containing protein lysine methyltransferase family protein; Swiss-Prot: sp|Q8W595|SUVR4_ARATH Histone-lysine N-methyltransferase SUVR4; TrEMBL-Plants: tr|K7MYR2|K7MYR2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0704900 LjG1.1_chr1 127307413 127316627 +
2 domain predictions
1 GO term
LotjaGi2g1v0222100_LC.1
n.a. Histone-lysine N-methyltransferase; TAIR: AT5G13960.1 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like protein; Swiss-Prot: sp|Q8GZB6|SUVH4_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4; TrEMBL-Plants: tr|G7KY38|G7KY38_MEDTR SET-domain protein lysine methyltransferase family protein, putative; Found in the gene: LotjaGi2g1v0222100_LC LjG1.1_chr2 67754274 67762191 +
2 domain predictions
1 GO term
LotjaGi2g1v0222100_LC.2
n.a. Histone-lysine N-methyltransferase; TAIR: AT5G13960.1 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like protein; Swiss-Prot: sp|Q8GZB6|SUVH4_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4; TrEMBL-Plants: tr|G7KY38|G7KY38_MEDTR SET-domain protein lysine methyltransferase family protein, putative; Found in the gene: LotjaGi2g1v0222100_LC LjG1.1_chr2 67754276 67762262 +
2 domain predictions
1 GO term
LotjaGi5g1v0153400.1
n.a. Histone-lysine N-methyltransferase; TAIR: AT5G43990.1 SET-domain containing protein lysine methyltransferase family protein; Swiss-Prot: sp|Q9FNC7|SUVR2_ARATH Probable inactive histone-lysine N-methyltransferase SUVR2; TrEMBL-Plants: tr|A0A0B2PE63|A0A0B2PE63_GLYSO Histone-lysine N-methyltransferase SUVR2; Found in the gene: LotjaGi5g1v0153400 LjG1.1_chr5 39928676 39937220 +
2 domain predictions
1 GO term
LotjaGi5g1v0209600.1
n.a. Histone-lysine N-methyltransferase; TAIR: AT3G04380.1 SET-domain containing protein lysine methyltransferase family protein; Swiss-Prot: sp|Q8W595|SUVR4_ARATH Histone-lysine N-methyltransferase SUVR4; TrEMBL-Plants: tr|K7N541|K7N541_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0209600 LjG1.1_chr5 51267859 51280204 -
2 domain predictions
1 GO term
LotjaGi5g1v0215700_LC.1
n.a. Nucleolar histone methyltransferase-related protein; TAIR: AT2G40020.3 Nucleolar histone methyltransferase-related protein; Swiss-Prot: sp|A7SG73|NADC_NEMVE Nicotinate-nucleotide pyrophosphorylase [carboxylating]; TrEMBL-Plants: tr|A0A072VNQ1|A0A072VNQ1_MEDTR Ubiquitin-binding WIYLD domain protein; Found in the gene: LotjaGi5g1v0215700_LC LjG1.1_chr5 52134788 52139416 +
2 domain predictions
1 GO term
LotjaGi5g1v0216000.1
n.a. Histone-lysine N-methyltransferase; TAIR: AT2G40020.2 Nucleolar histone methyltransferase-related protein; Swiss-Prot: sp|Q946J2|SUVR1_ARATH Probable inactive histone-lysine N-methyltransferase SUVR1; TrEMBL-Plants: tr|K7N558|K7N558_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0216000 LjG1.1_chr5 52177958 52182152 +
2 domain predictions
1 GO term