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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0078800 |
| Transcript ID | LotjaGi1g1v0078800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histone-lysine N-methyltransferase; TAIR: AT2G40020.2 Nucleolar histone methyltransferase-related protein; Swiss-Prot: sp|Q946J2|SUVR1_ARATH Probable inactive histone-lysine N-methyltransferase SUVR1; TrEMBL-Plants: tr|A0A0L9UWG4|A0A0L9UWG4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0078800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:11365226..11368091) extracted from Lotus japonicus Gifu genome v1.2.
TTATCATTATTATTATTTTTCTATTTTCCATATCAAGAAGTGAAGCCGTACCATTTCTGGCACAGACACCACTGCATTGC ATATTTTTGCATGTCCTTCCTTTTTCATTCAAAATACAAATCGTCACAGCTCAGAACAACTCTGTTAGGGTGAGCAAGAA AACATCACACAGAGTCTCTTTTCTCTTCTCTCATGGTTTCATCTTTCACCATTACACAAAAAAAAAAACCAGTCCTTTTT CATTTTCATTTCAGTTCCTTCCTTCTGCTGAAAGAAGAAAAGCTCAACAATGGCACCCAGAGGAAGACCACCCAAAAAGG TTCCATCTTTCACTTCATCACCTCCATTTTTTTCTCTCTTTCTCGATTTTCCCCTGTTTTCATTGACCTTGTTTTTCTCT TTTTTTAGCATAATTTTTTCATTTTTTTCATTTTTTTGCGTTAAGGTTCCCATTTCTGATTGAAAAGTTTCAATCTTTAC TCTCCAACGTGTTTTTCAGCTACCCTTGTTGTTCTGGGTCATTTTCTCAACGTTAATGGAGTTTTCTTTTGTTTGCAGAA CAGGGTGGTGGGTACCACGCGCATGGATGCTGCCCTTGATGCAATGCTTCAATATGGGTTTGAGAAACGACTCGTTCGAG AAACGGTTCAGGAGCTTCTTGATGTTAGTCTTCTTCTTCTCTTCTACACACACTAGTGCTTGTTGTTTCAATTTTCATTG TTTTGGTTTTGCTTTTAATCTGTTGTGGGTTTGTGTTGGGGTTTTGTTTTGTTCAGGTTTATGAAGGAAATCAAGGATGG CCCTTTATTGAAGATGCCTCTTACAAGCTCCTAATTGAGACCATTCTTGGAAAACAACAAAATTCTGAACCAGACAAGGT AAACATGTCAATGTTCTTGTGATTTCATTTGCTTGTGATTTTACACATTAATTGTTTTGGGGGTTTGGTAAAGCTAAGAG TAAAGCTAGCTCCTTGTGTAATGTAGCCAAGTTCTGGTCACTAGCCTCTAGGAAGTGCAGAGAAAAGGATATTATGGTGT CCTTCATATTGAGTTAAGAAGTATATGATATTCACATCCTTTGTTGATTTGTGCCTAATGTGCAGTATAAGAAAGATGGG CATATGATTTTTCTTAAGTACCTCCAAATTCATCACTTGATAAGAAACTATATATCTGACCAACTCATATGGTTTAACCT TTTAATTTTGTTTGAGATTCTGAAGTTCTGGTAATATATAACTTACTGCTGTAATTAGCTTGTTTTCATAAGCCATAAGG GTATTTTTTCCCAAATGTGTAACATTTATGGAGAGTTGGAGACATTCTACTTTCTCTACCCATAGAGTTTTGATTATTAT CTCTTCTTCCCTGTTTCTATTGGTTGTGTATCTACTTTCCCAATGTTCATTCATGCTGTCCAACCAAGTGGAATTTTGAA TTTTCACAACATTGATTTAATTGAAATCAGCTAGGTGGATGAACAATTAAATATTGTGATTCATTTGGACAGCGTATTAA ACACTAGTCTACTTTTTATTGCTCCTTAGACTAATATATAATTTTCCATCTTTCAAACAAAAAAAGGAGGATTCTTTGCA AGATAATGCAAGAAGGCATGATGTTGCTGAGACATCCAGGAATACTGAAGTTGGCTCCTCTGACATGGTCGCTCAGGACT CTTCATTGGCGACAGCCAGGATTACTGAAATCGGCTCGTCTAGCCTGGTAGCTCAGGACTCTTTATTGCTGACAGCCAGG ATTACCGAAATCGGCTCATCTAGCCTGGTGGCTCATGACTCTCTACTGCAGACTAATGATGGTTTGGACTCTGCATCTCA AACCAATGATCAAGACTCTGCTTCACCTGGCAAACTATTTTTTTTTGAAATGTCACCTGGCAAACTAGAAACTGGTAATG TAATTGCATTCTCCTTCAGTTCCTCCCATTTGAAATATACTCACATTACTCAGTCACTGCTTAGGAGAAGCAAGATTTGA ATCCCTTTTTATAGCAGTAGGATATCAACCATAAATCTATCTTGTTTAAAGATTGATGACTTTTTAGCTGGTATTCAATT CATTAAGCGGAACTAAGTAATATCAAAAATTCGAAATCAAAGCTTTATGTGAAGAGAGCCTCAGCCTTTTTTTAATTTGC ACATACAAGATAATTTTTTTGGTTAACTCCATCACATTGAGTTAACAATGTCTAATTTTCTGAAAGAGCTTAAGAAAAGC TATTGTGATTCTTCTTTTGTTAATGTCAATAGGTTGTCTCTTTGTATTTTTTCAGATAAGCCTGTGCCAACCAATAGAGG AGGAAATGAACCAGGCATGAGGGCGGAGTGTAAAACTGAGCAAAAGCTTGTGGATGATGTCAAAAGAAGCAGTCATAGCA AGTTTGCCAGTAATGCTGAGAGCACTGTTGTGAGAGATTCTGGGATTGAATCCTCAAAAACACCTGAAAATGTTCCATGC CGTAGGCGTAAACCTTTCCATGGATTGATTGGTAGCAATGGCGACGGTGACGGCGGGGGGCTTGTCTACTTTGCACTTCC ACCATTACATAAACAGATAGAGTTGTTGACACGTTGTGCTCCCCGGAGTGTCCGTAGCCGAAGGAGGAAGAGTAGATGGG ATGAAAAGCCAGATGGTATTGAATGAATCTTTTGGTTCTAGTTTTAGTACTTGTATGAAAGCCAGGGATGATAGGGAGCA ACTTTTTGTACATGAGACATTGGAGATTTCTCCATTGGCTGTTTTTTGTGACCTAGTTTAGTTTAACATGATATCTGAAA CGAATTTGTAATCAAAATAGTTCCCTTACTGATTATATGAATTGCTCTTGCTTTACCATGTTTCAC
CDS sequence (LotjaGi1g1v0078800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACCCAGAGGAAGACCACCCAAAAAGAACAGGGTGGTGGGTACCACGCGCATGGATGCTGCCCTTGATGCAATGCT TCAATATGGGTTTGAGAAACGACTCGTTCGAGAAACGGTTCAGGAGCTTCTTGATGTTTATGAAGGAAATCAAGGATGGC CCTTTATTGAAGATGCCTCTTACAAGCTCCTAATTGAGACCATTCTTGGAAAACAACAAAATTCTGAACCAGACAAGGAG GATTCTTTGCAAGATAATGCAAGAAGGCATGATGTTGCTGAGACATCCAGGAATACTGAAGTTGGCTCCTCTGACATGGT CGCTCAGGACTCTTCATTGGCGACAGCCAGGATTACTGAAATCGGCTCGTCTAGCCTGGTAGCTCAGGACTCTTTATTGC TGACAGCCAGGATTACCGAAATCGGCTCATCTAGCCTGGTGGCTCATGACTCTCTACTGCAGACTAATGATGGTTTGGAC TCTGCATCTCAAACCAATGATCAAGACTCTGCTTCACCTGGCAAACTATTTTTTTTTGAAATGTCACCTGGCAAACTAGA AACTGATAAGCCTGTGCCAACCAATAGAGGAGGAAATGAACCAGGCATGAGGGCGGAGTGTAAAACTGAGCAAAAGCTTG TGGATGATGTCAAAAGAAGCAGTCATAGCAAGTTTGCCAGTAATGCTGAGAGCACTGTTGTGAGAGATTCTGGGATTGAA TCCTCAAAAACACCTGAAAATGTTCCATGCCGTAGGCGTAAACCTTTCCATGGATTGATTGGTAGCAATGGCGACGGTGA CGGCGGGGGGCTTGTCTACTTTGCACTTCCACCATTACATAAACAGATAGAGTTGTTGACACGTTGTGCTCCCCGGAGTG TCCGTAGCCGAAGGAGGAAGAGTAGATGGGATGAAAAGCCAGATGGTATTGAATGA
Protein sequence (LotjaGi1g1v0078800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPRGRPPKKNRVVGTTRMDAALDAMLQYGFEKRLVRETVQELLDVYEGNQGWPFIEDASYKLLIETILGKQQNSEPDKE DSLQDNARRHDVAETSRNTEVGSSDMVAQDSSLATARITEIGSSSLVAQDSLLLTARITEIGSSSLVAHDSLLQTNDGLD SASQTNDQDSASPGKLFFFEMSPGKLETDKPVPTNRGGNEPGMRAECKTEQKLVDDVKRSSHSKFASNAESTVVRDSGIE SSKTPENVPCRRRKPFHGLIGSNGDGDGGGLVYFALPPLHKQIELLTRCAPRSVRSRRRKSRWDEKPDGIE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 115 | 115 | 6.3E-66 | – | |
| PANTHER | 1 | 115 | 115 | 6.3E-66 | – | |
| Pfam | 15 | 73 | 59 | 2.3E-20 | ||
| MobiDBLite | 73 | 96 | 24 | - | – | |
| MobiDBLite | 73 | 107 | 35 | - | – | |
| PANTHER | 137 | 300 | 164 | 6.3E-66 | – | |
| PANTHER | 137 | 300 | 164 | 6.3E-66 | – | |
| MobiDBLite | 184 | 205 | 22 | - | – | |
| MobiDBLite | 291 | 311 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Histone-lysine N-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives. |
Expression pattern of LotjaGi1g1v0078800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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