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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0103300 |
| Transcript ID | LotjaGi1g1v0103300.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | MAU2 chromatid cohesion factor like; TAIR: AT5G51340.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|O15743|SPNA_DICDI Protein spalten; TrEMBL-Plants: tr|K7KAE5|K7KAE5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0103300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:15876638..15883954) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGGCGGTGGCGGCGGGACTCTGGACTCTGGCGGAGCACCACGAGAACACCGGCGAAATCGCCAAAGCAATCAAATG CCTCGAAGCCATTTGTCAAACCGAAGTCTCCTTTCCCCCTATCGTCGAGGTCAAGACTCGTCTTCGCATCGCCACTCTCC TCCTCCACTATTCTCACAACGTCAACCACGCCAAAGCACACCTCGAACGTTCCGTTAGTCTCTCTCACACTCTCTATCAC TCTCTCGATTTTCGATTTTCCATTATCATCAGCGCAATTTTGAAACTGTTGATTTCTGTTTCGTGTTTTTTCAGCAATTG CTTTTGAAATCGATTCCTTCATGCTTTGAATTGAAGTGCCGAGCGTTCAGTTTGCTCAGCCAGTGCTACCAGCTTGTTGG CGCGATTCCGCCGCAGAAGCAAGTGCTGCACAAGGGTCTTGAGCTCACAGCTTCTGTTGGATACGAGTGAGTTACAGCTT TGCTTCTTTATCAGCAATGGCTATTGTTATTTTGTAGATTTTGTTTTAAAAAATTAGAATCTCGCGAGGTTTTATGTTGC GCTATTGGTACATAAATGGGACAGTGTGTTGTTGAATTGATCATTTTAAGTGTGTTTGGATCAGCGTTTGTGAATTTCGG TAAAATTGATTATAGTCAAAGTGAGTTGAAAATGAAGGGGTTTGTGTTTGGATACATTTATGAAAAAATGATTTTTGTTG GATAATGTTGTTAAATTTAGTGGTAAATCTCACAATTAATTTGTATGAGTTATTATTAGGGTGTTTGGTTTAGCTTTTGA AAATCAATTATAGCCAGAAGCTCCAAAGTGTAGCTTTTGAGTAGAAGTGCATTGGCTTTTGTGCCAACTGCTCAACCAAA CACAGTTCATGTTTGGTTTGGACACACGGTGGAAAGCCACAGTGAGCTAAAAGCACGGTGGACAAAAGCAATTTCTCTTA GCTTTAGTGGCTGTCCACCTCGACCTTGGCTTCTGTGGTTTTTCACTAGTATCTGAACATGCATTCAAACTATGATATAT TGGCTACTTTGGACTTGGGGCCGTGTTAGAACTTAGAAATTAGAAGAAGTTAGTACGATAGCACTGGAGAAGAGTTAAGG AAAGGAATGTAGTGTTTGTTGAGTGGACAAGCGAGGTCTGAGTTTGAGAAAGCGAGCAACTGTGTAGAACATTTGGGATA CCGAGAGTATTATTATTATTTATTATTATTGTTGTTGTTGTTATTATTATTATTGGTATTACTACTACTATTATTATTAT TGTTGTTATTATTTCCGTCCTCCTTTTTATACCTGTCATTTCTCCCTCTGAAACTAATTAACTGTTTCAACTAACTAACA TCGACTGCCCAATTTTTAATGAAGTTTTGCTAACACAGTACCAATAGATAGTAAATAAGAGCTATATACTTCATTGATAA ATTGTAACAAGCTTGGTGCATACATGTATCAGCTTGATGGGGAGTGTAAAAATAGTAGGATGTAAATAGTAAATGGTAAT TATAAATGTTGTATACATATTCTGGGCATTTTCAGCCTGAAAATTACCTTTGACTTTTTTATTTCACACGAGGGCACGTC TCTGATATATGTCAGAGGTGTTCGGCATTTGATATTGATGAAGGGCTGGAAAGTTTTCCTTTTTTTCTTTTAATTCTGGG CTAGTTACATTTGAATTATTTATCATATATGTGTATAACATGTTGTCAATAATTATATGAATGTACTCATGCCGCTTCTA CTACGTATTCGTATTTTCTTGAAGGATTTCAATGAAGTTATGGTCTTGCAACTTCAATTCACAGCTTGCAAATGCTTTGT CTATTGAAGGAGACTACCGAGGTTCACTCTCTGCCTTAGAGTGTGGATATGCCTGTGCTACTGAAGTATACTACCCGGAA TTGCAGGTACAATGTCAAAGTTAACAAGAAAAGAGATGTCCTTTGTTCCTTCTTTTCTTTTGACTGCTAATTTATTAATG AATTGAATTCTTACCACTAATAGGTGGAACCTTCTGGAAACTTATTGTCTTTTACTTTTGTAACAAAAATCCTAAAATCA CTTTTTGAATAACTAATGTTATATATAGTTAAAACTACATTACAACAACAACAAAATCTTTATCCCACTAAATGAGGTCG GCTATATGGATCACAATACACCATTCAGCTTGTTCAATGATATATATATATATATTAGTGGGTAGGCCTCTCCCAACAAA TTCTTCTCCACATACACCGCCCAGGGATCGAACCCTCGATTAAATGCTTAAGAAATATATACTCTCAAATATTCCAGCCG TTGTTGTCTTTCCCCTTATTCTTAAGTCCTCAGTCCCCACTTTCATCTTTTTATACTGCCTCGATCAAACTTTTTACTTC TTTTAACAGAGGTCTCTAGTCTCTCTAGTATGATATTATTGACATTAGCCCGTCTAATATCTTGTTTATAACAATGGACC AGATGTTTTTTGCCACTTCAATACTGCATGTCCACCTCATGCAATGGGACGATGATAGTTTGGTTGAGCAGGCTGTTAAT AAATGCAATGAGATTTGGGAGTCAATTGAGCCAGATAAAGTGAGTGCAAATATCCTTTAGCTTTGCTTTTGTTTATGTAG ATAATGTACACTCACAAACACATGCATGTTTTCAACTAAACTGTTCCATGATTCCTTTTTTACTTTGGTCTAATGTTTTC CCCCTTGCTTCCACGCACTCCTCAGAGAAGACAATGCCCTGGCTTACTCTTTTACAATGAATTGTTGCACATATTCTATC GACTGCGGCTATGTGATTACAAGAATGCTGCACCCCATGTAGACAATCTGGATGCTGCCATGAAGACTAGTATGCAGCAA ACACAACAAATGCAAGAGCTAGTGAAGGAGCTCAATGCTTTAGATCAAAGTCTCTCCAGATCTGACCTTTACCACAGGGA TAGGGCAGCACTATCTAAAAAGCAAGCAATGATTCAAGAGCAGCTGAGAAACATGACTGGATTGAGTCCAATTGGTCGGG AATCTCTGGAACCAGTATACTTTGGGAATGCCAGAAGGTCAATAGGAGATAAGCTTCAGTTAGCACCTCCTCCTATTGAT GGTGAATGGCTTCTTAAAAGCGCTGTCTATGCATTAGTTGATCTAATAGTTGTTATATTTGGGCGCCCAAAAGGACTTTT CAAGGAGTGTGGAAAGCGCATAAAGTCTGGGATGCGTATAATTCAAGGTTGTTCAGCAACTGTTTCTGTATTTGCTTGTG TAATTCTTTCTTCCTCTTTGGGCTTTGGTCTAAATTTATTGCTTGACATATAAAAGCAAATAACTGGACAGCAAATGCAA ATACTGCTAATTTGGAATGCAAAATCTTAATTGCTTGTCATGGTATGTCAAATAAATGTGTATAAATAAGCTTTCCACAT AGTGCAGCGCTGATCTTTGGTCTTGTATGAATTATTCCTTTTTTATATGCGCTTCCTCTGTCTATCACTGTTACCAGATG TTCCACAGTCATAAAATGTCCTTTTTATTGGTCCCTTGGCTTTTGAATTATTTGTTCTGAAACCATGATGAGTGGGTTAA GTTGTTTATGTTGTTCACACTTTGGATTGCTGTTGTGCATTGCTTTGGACACTAATATATTTAAGTCATTGCTATTGTGC ATTGCTTTGGAGACTAAATAATCCTTGCCACTTTGGACTGATTTTCTATTTGAAAATAATATTTCTTCCTTGCAGATGAG TTAGTAAAGCTTGGAATTACTGATGGCGTCAGAGGTGAGATTCATTATTTTTATCTTGCCCACAAACAAGGGTTCATTAT GCAACCTTTTTGAACTTTCTCTTTTAGCAGAAGTGGACTTACAACACTCCTCTATCTGGATGGCTGGAGTTTACTTGATG CTACTAATACAGTTTCTTGAAAACAAAGTGGCCATAGAGCTCACAAGAGCAGAGTTTGTTGAAGCACAAGAGGTTGGTTA TGTTCCTATCGTATTTTTTGTTAGCTCTAAGGATGAGAAGATGTGATAGCTTGCATTTTATGGTACAAAATTTCAATTCT CAATTAGTAATACACCTCACTAGCTGGCTTGCTTCTGGTGATATTTTTCTTATACTAGTTGATTTAAACAGTTGGCAGTG AATTTGCATCCCCTAATGCTCCAGATTTGAAACCATTGATGAGAATCTCTGCAATTTTTCAGGCTTTGATACAGATGAGA AATTGGTTCATGCGGTTTCCAACTATATTACAGGCATGTGAATGCATCATTGAGATGCTTAGAGGCCAATATGCTCATGC TGTTGGCTGTTATAATGAAGCTGCTTTTCATTATATTCAAGCAGTAAAGGTATATATTAGATTTGTCTGTAATGAGATAT GATATAATAGCAATGATAAAGTGCAGTCTTTGTTTTGGTAATTGTGACGCAATATACATTCATACTGTGGTTTGGCATGG TAGAAGCCATATTTATGGTTTTCTGTTCACTGTTCAGAGATTTATTAAAAATTGTTTGTCAGAATAATTTCATGGTAATC CAGAAATAACTACATATTTCTGTGCAGCTTACAGAGAGTAAATCAATGCAAACTATGTGCCATGTTTATGCAGCTGTTTC ATATATCTGCATTGGTGATGCTGAATCTTCTTCACAGGTGGAGCACCTATGCTGCAAATTGAATTGGTCATATGTACCAT TTTTTAAGTATTCAATTCAGTAGACAATATCTTTTGACCAAATCATAGATTACCTGCAGGCACTTGATTTGATTGGGCCA GTTTATGGAGTAATGGATTCTTTTGTGGGAGTTAGAGAAAAAACAGGTGTTCTTTTTGCATATGGTCTTTTATTGATGAA GCAACAGGATCTACAAGAATCAAGGTTAGTTTTGACTTTTGAGATAATTTTTGTAACTTAATCAATCAGTTTGTTTCTGT GTATGAATGTCAACTTTATAATTTTATGCAATGTGTCAGAATATTTCTTCTTTTATTTGATAGGAAATGATTTAAAATCT TGCTTGAGAGCTGACCCTTGCACTGCAGAACACAGAAGATAAGGATATTTCTGGAAATAAACTGAATAATAAACTCAAAC GAATCCAGCAGTTAAACCTTCTTACAAGGGAAAACCCTTACAACTCAATACTCAATATGAATCCAAACCTAATGAGAGGA CTCTTTTTTATTATAAACTAACCCTACTAAGCAAATAACACTAGCCCAACATACACCCAACTCAAATAATAAAATAGACT CATCCAACAAGCTTAAACTAACTGACAGAGACAGATGAAATCAACCCGGCCCAAAGTCTAATAGGCCCATCCTGGGTCCG TGCGGCTCAATTGCTGCCTTCTCTTCATCATCACGCCCAAAGGGCTTCTTCCTTCTAGAGTAAACCTTCCAAATACGAGG CTTCTCTTGGATCCTAACATTATGTCATATAGTACGTTTGAGTGTTATTTGGACCTTAAAATTAGGTAACAGAATAATTT ACCTCACATGCAACTGAACAGTTGCATACATTCCCATATATCATTTATCTTTCTTCCTCCTTCATCTAAGTTGCAATTTT TTTTTATTGCAGAAATCGCCTGGCAAGGGGATTGCAACTGACACATACTTATTTGGGGAACCTTCAACTTGTTTCTCAAT ATCTGACAGTCCTTGGCAGTTTGGCACTTGCGCTGCAGGACACAGCACAGGCGAGGGAGATATTGAAATCATCTTTGACC TTGGCAAAAAAGCTTTATGATATTCCTACTCAGATCTGGGTGCTGTCTGTTTTGACAGGTACTTCTCTAAGATTGTAGTT TGTGATTGTAATAATTCTCCCTTTATGACTTTCAGGAGTGCCCTAGTTACAGTTTGCAAATCGCACTATTTTATTCCTGT CTGAGTATTGAGAGTTGAGACAACCTTCAGAGTGTCTTGAAGATTTGTGTTTTTCTGTGGCTTAATAATAAACCTTGTTT AAAGGTGGCTGTAAGGAAAGTCGGAAACTTTCTCCCTGAGCTATATGAATCAGTTGTCTAATTATACAACAGCCTTTTAC TTTTTTGGGTGTTACTTTGTGTGGTAATTCTAAGTCAGTCTCTTTTTGGGATCCAGTTATCCAAATTATTTGTGAAGAGG TTTTATAGATGCAATGGTTCTTTTTTTTTTCTGTGATTAGTTCACCTTAGTCCAGTCTTGTTCATGAAGTAATCCTTTCT ATTAACTCTATTTACTATGCATGGGGTTTTACTGAGAGGATAAAGGAAATTGCAATTCACAAGGGCCTTCTTTTGTGTAG GACGAATTGAGACGGTATTTTGTAAATACAGAATTATCTTGTGATTATGCTGAAATCAAATACATAAATATGAATCAGAA TAGAACACACCATTGATTGAGTTGGGAGATTTGTTATAAGGGTCGTAGAATATCCGTGTCTTAAGAAATCTGCCATGTGA AGGGTTTACCCTTGGTGAAGATTTACTTATTACTTATTAATCCATCCTATAATTCACAATAAAATGCTTCAAAGTTTATC TTAGATCTGATTTTTGGATCAAGTCCAGGCAAAAATCAACTAGCCCTCGTGTATCAACTTTATGGTTAAGATTTACTCAT TATTAATCAACTGTATGGTTAAGATTTACTTTCACACTTGGCTCTCTCACTTGATACATCCTATTGACAGATAATAATTA GATAGATAATTGAGACCAAAGCCCAAGGGCGCATTGTCGTCTAGGGCTATCTCTGTATTAATGTTATTTGTTGTATTTTA TGCTTTTTTATGTTCTGTCTTTGCATTTATTGTCCTTAGTTGCATTCTCTTCATTTCTTTCTTTAAGTTTGTTTTTATTG AAAACGAGTTTATTTTACGAAGATTTGGTTCTTGCAGGTTTATATAAAGATTTAGGGGAAAGGGGAAACGAAATGGAGAA TGCTGAGTACCAGACAAGAAAAACGATTGATTTGCAGAGGAGAATAGCAGATGCAAATGCTTCCATCTATCATCTTGAAA TAGTAAGCTAATTTGACAAAGAAGTACTATGCGTTATATGTTTGGATTTATACTGAGTTATTGTTTGTTTTACCATTTTG ATTAACAGATTAACAAAGTAAGATTTGAAGTTGACCCATTGCATGAGTTGGACGCCAAGCGTGCAATGGCAGGCCCAACC ATGGGAGTCAGTCTTGACATCCCAGAATCTATTGGTCTGTCAGCACCCTTACCTGCTCCATCGTCTTCAAGACTAGTTGA TATAGACACTGGAAAACTTAGAAAATGGAGATCTTAG
CDS sequence (LotjaGi1g1v0103300.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTATGGTCTTGCAACTTCAATTCACAGCTTGCAAATGCTTTGTCTATTGAAGGAGACTACCGAGGTTCACTCTC TGCCTTAGAGTGTGGATATGCCTGTGCTACTGAAGTATACTACCCGGAATTGCAGATGTTTTTTGCCACTTCAATACTGC ATGTCCACCTCATGCAATGGGACGATGATAGTTTGGTTGAGCAGGCTGTTAATAAATGCAATGAGATTTGGGAGTCAATT GAGCCAGATAAAAGAAGACAATGCCCTGGCTTACTCTTTTACAATGAATTGTTGCACATATTCTATCGACTGCGGCTATG TGATTACAAGAATGCTGCACCCCATGTAGACAATCTGGATGCTGCCATGAAGACTAGTATGCAGCAAACACAACAAATGC AAGAGCTAGTGAAGGAGCTCAATGCTTTAGATCAAAGTCTCTCCAGATCTGACCTTTACCACAGGGATAGGGCAGCACTA TCTAAAAAGCAAGCAATGATTCAAGAGCAGCTGAGAAACATGACTGGATTGAGTCCAATTGGTCGGGAATCTCTGGAACC AGTATACTTTGGGAATGCCAGAAGGTCAATAGGAGATAAGCTTCAGTTAGCACCTCCTCCTATTGATGGTGAATGGCTTC TTAAAAGCGCTGTCTATGCATTAGTTGATCTAATAGTTGTTATATTTGGGCGCCCAAAAGGACTTTTCAAGGAGTGTGGA AAGCGCATAAAGTCTGGGATGCGTATAATTCAAGATGAGTTAGTAAAGCTTGGAATTACTGATGGCGTCAGAGAAGTGGA CTTACAACACTCCTCTATCTGGATGGCTGGAGTTTACTTGATGCTACTAATACAGTTTCTTGAAAACAAAGTGGCCATAG AGCTCACAAGAGCAGAGTTTGTTGAAGCACAAGAGGCTTTGATACAGATGAGAAATTGGTTCATGCGGTTTCCAACTATA TTACAGGCATGTGAATGCATCATTGAGATGCTTAGAGGCCAATATGCTCATGCTGTTGGCTGTTATAATGAAGCTGCTTT TCATTATATTCAAGCAGTAAAGCTTACAGAGAGTAAATCAATGCAAACTATGTGCCATGTTTATGCAGCTGTTTCATATA TCTGCATTGGTGATGCTGAATCTTCTTCACAGGCACTTGATTTGATTGGGCCAGTTTATGGAGTAATGGATTCTTTTGTG GGAGTTAGAGAAAAAACAGGTAAATCGCCTGGCAAGGGGATTGCAACTGACACATATTTGGCACTTGCGCTGCAGGACAC AGCACAGGCGAGGGAGATATTGAAATCATCTTTGACCTTGGCAAAAAAGCTTTATGATATTCCTACTCAGATCTGGGTGC TGTCTGTTTTGACAGGTTTATATAAAGATTTAGGGGAAAGGGGAAACGAAATGGAGAATGCTGAGTACCAGACAAGAAAA ACGATTGATTTGCAGAGGAGAATAGCAGATGCAAATGCTTCCATCTATCATCTTGAAATAATTAACAAAGTAAGATTTGA AGTTGACCCATTGCATGAGTTGGACGCCAAGCGTGCAATGGCAGGCCCAACCATGGGAGTCAGTCTTGACATCCCAGAAT CTATTGGTCTGTCAGCACCCTTACCTGCTCCATCGTCTTCAAGACTAGTTGATATAGACACTGGAAAACTTAGAAAATGG AGATCTTAG
Protein sequence (LotjaGi1g1v0103300.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLWSCNFNSQLANALSIEGDYRGSLSALECGYACATEVYYPELQMFFATSILHVHLMQWDDDSLVEQAVNKCNEIWESI EPDKRRQCPGLLFYNELLHIFYRLRLCDYKNAAPHVDNLDAAMKTSMQQTQQMQELVKELNALDQSLSRSDLYHRDRAAL SKKQAMIQEQLRNMTGLSPIGRESLEPVYFGNARRSIGDKLQLAPPPIDGEWLLKSAVYALVDLIVVIFGRPKGLFKECG KRIKSGMRIIQDELVKLGITDGVREVDLQHSSIWMAGVYLMLLIQFLENKVAIELTRAEFVEAQEALIQMRNWFMRFPTI LQACECIIEMLRGQYAHAVGCYNEAAFHYIQAVKLTESKSMQTMCHVYAAVSYICIGDAESSSQALDLIGPVYGVMDSFV GVREKTGKSPGKGIATDTYLALALQDTAQAREILKSSLTLAKKLYDIPTQIWVLSVLTGLYKDLGERGNEMENAEYQTRK TIDLQRRIADANASIYHLEIINKVRFEVDPLHELDAKRAMAGPTMGVSLDIPESIGLSAPLPAPSSSRLVDIDTGKLRKW RS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 406 | 405 | 8.2E-155 | ||
| Coils | 126 | 146 | 21 | - | – | |
| Gene3D | 327 | 500 | 174 | 3.8E-5 | ||
| PANTHER | 420 | 504 | 85 | 8.2E-155 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Mitotic sister chromatid cohesion | The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission. |
Expression pattern of LotjaGi1g1v0103300.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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