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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019539
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.781s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0357339.1
n.a. PREDICTED: galactokinase-like [Glycine max] gi|356565073|ref|XP_003550769.1| chr0 188139972 188145393 -
2 domain predictions
1 GO term
Lj4g3v2263880.1
n.a. PREDICTED: galactokinase-like [Cicer arietinum] gi|502150796|ref|XP_004508128.1| chr4 31361898 31367834 -
2 domain predictions
1 GO term
Lj4g3v3015190.1
n.a. Galactokinase [Medicago truncatula] gi|357520677|ref|XP_003630627.1| chr4 40375349 40384493 +
2 domain predictions
1 GO term
LotjaGi4g1v0332900.1
n.a. Galactokinase; TAIR: AT3G06580.1 Mevalonate/galactokinase family protein; Swiss-Prot: sp|Q9SEE5|GALK1_ARATH Galactokinase; TrEMBL-Plants: tr|I1MRT3|I1MRT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0332900 LjG1.1_chr4 71191781 71197357 +
2 domain predictions
1 GO term
LotjaGi4g1v0440500.1
n.a. Galactokinase; TAIR: AT3G10700.1 galacturonic acid kinase; Swiss-Prot: sp|Q8VYG2|GALAK_ARATH Galacturonokinase; TrEMBL-Plants: tr|G7LJJ0|G7LJJ0_MEDTR Galactokinase; Found in the gene: LotjaGi4g1v0440500 LjG1.1_chr4 81405558 81415609 +
2 domain predictions
1 GO term
LotjaGi5g1v0126900.1
n.a. Galactokinase; TAIR: AT4G16130.1 arabinose kinase; Swiss-Prot: sp|O23461|ARAK_ARATH L-arabinokinase; TrEMBL-Plants: tr|A0A151SH14|A0A151SH14_CAJCA Galactokinase; Found in the gene: LotjaGi5g1v0126900 LjG1.1_chr5 28035126 28051152 +
2 domain predictions
1 GO term
LotjaGi6g1v0260600.1
n.a. Galactokinase; TAIR: AT3G06580.1 Mevalonate/galactokinase family protein; Swiss-Prot: sp|Q9SEE5|GALK1_ARATH Galactokinase; TrEMBL-Plants: tr|I1MRT3|I1MRT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0260600 LjG1.1_chr6 57326429 57332243 +
2 domain predictions
1 GO term