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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0332900 |
| Transcript ID | LotjaGi4g1v0332900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Galactokinase; TAIR: AT3G06580.1 Mevalonate/galactokinase family protein; Swiss-Prot: sp|Q9SEE5|GALK1_ARATH Galactokinase; TrEMBL-Plants: tr|I1MRT3|I1MRT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0332900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:71191781..71197357) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGAAACACGAGGAGCTTCCGATCCCGATTTACGAGAACCTCGAAGGTGTTTACGGCGATGGTTCATCGCTCGAAGA AGCTCAGCTTCGTTTCGACAATTTGAAGTCCAAATTCATCCAATTCTTCGCTCACCCTCCTCAACTCTTCGCTCGTTCAC CAGGTTGAGATCATTCATTCATTTTCATGATACCGTTGGAAAATCATGCAATCGTTGTTTTCATTGTTTTGTAATTCCAA TAGCATTAACAACAACCGATGATTATTATTATTATTGGTTTCGCGGTGCAGGGAGAGTGAACTTGATCGGAGAGCATATA GACTATGAGGGTTATTCGGTTTTGCCTATGGCTATTCGCCAAGATACAATCATCGCGATTCGGAAGAATGAAGCCGAGCC TGTTCTTAGGATCGCTAATGTTAATGATGAGAAATATGACATTTGTACTTATCCTGCTGATCCTAACCAGGTAGATAGAT CCTCAATTAGTTCTTAATTTGTGTGTTTTTCTTCATGATTCATTGTTTTGTTTTGTTAATATACTCTCTCTGCTTTTGTT GTTCAATGAAGGAACTTGACTTGAAGAATCACAAATGGGGCCATTACTTTATTTGTGGGTGAGTCTCTTTCATATTTTTC TTAACACTTCTTGTTGTTAGGTCGTTTTCAAGGTATGCCCACGAATTTAGGTAGATGTACGAGGCTGCGTTTTGATGTCC TTAATTAATGAACCTTGCTTAACAAGGTAATGCATATAGTATTTTATTTGGACAATTAGTCCTAGACGCGCCTAATATGC GTACCGGTTACGGTTTAATTTGTAAAAAGAGGGGCTAGCTAGTTATTTATGTGATATATTTACTATTTACCGAGTGAAAT GATGTGTATGGAATGAAGCTTATGGATAGATGTTAGTGGCTGATTTTCTTTTTTTGGGCGAATGAGATAAATTTGTTGCA TTGTTGTTTGATTTGGTATTGAATGATTATAAAAATTTATGTAGGTACAAAGGTTTTCATGACTATGCAAAACTGCAAGG AGTGGATGTTGGTCCACCTGTTGGGCTTGATGTTGTTGTTGATGGGACCGTGCCTACAGGTGTGTTCATTAGTTTTAAAT TAAAATGGTGCTTCCAAATTTACCTCTAAGTGAATGTTGATCAATATTTTTGGACTAAAGCAGAGATGACAGAGTCATGC CATTTGTTTCTTTATGGGGTTAAATTAAAAGAACAATATCTATTTTTATTTATTTATTTCAGGTTCCGGACTATCAAGCT CTGCGGCGTTTGTTTGTTCTTCTACAATTGCTATTATGGCTGCTTTTGATGTGAACTTCCCAAAGGTCTGCCTTTGGACT GGAATATGTATAAGAGTTTGTGCTTTGAGGAGAAAATGCAGTTCAGCTCTTGCTGAATTTTTGCATGGATAAATTGTTTG TATATATAGAATGTTAGGGTTTGAAAAAATTATTCAGAGTTCTGATAAGCTAGCATTACTTTGTAACCAAAGAAAATATA TAACTTTTTTTATGTGCAGTAATTTAGGGTTATATCAAATTTGATAACAGTTTGCCCTGACATGGCAGTATAACTGGGAT TTCACGAGTTCATCTTTGGAAAATCTGATATAGCCCCTATTTCAAACTTTTTGTGACAGCTGAAATTGATCTTTTGTGAA GGTTTACACCAAAAGTTATATAGCTGTATTATGATAATTTAACCTTGTGTTTGTTAAATCAAATATGTTTTATTTTGCCT TTTAGATGGATGATCACCAGTGTTTTTTTGCAAGCATGTCTTTGTTTTGAAAAATAATTTCTGTTGTTTAGTTTGTGGGC ACTCTTATTTTGTTTCTAACATACATTATCATATGCTTTTTACAGAAAGAAATTGCACAAGTCACATGTGACTGTGAACG ACATATTGGGACACAATCTGGTGGGATGGATCAGGTTGGGCAGACCTTTCATTGCAGATACATCCTAATTTAATTTTAAT GTGAATGTCTCCCAATTACCTATCCATGTTGTCTTTTCCTCCAAATCACCTTTCTATATAGGATGGTCTTCGTAACTGCT GTTTAACAGCTTTTTGCTAATTGGCACTGATTGACAACTGATATTTTCACCAAGAACTCAAAGTATAAGTGTATTAGATG AACTATACATACATGGTTTTGTAGTTATCCATCATTCAGAATGAAACTATGTTAAAGATATTCTACTATCTGCCATTTGG TTTCTCTTCTCAATTCTATGAAATATGATTTTGAATCACAAGCTCTAAAACATTATATGTTCTAAATAAGTTTTTTCTAG GTTGGGAGTGATATACATGGTTTAATTACTTTCCATAAGTTCGATTACTTGTAGGCCACTATGCTGGGGGCCTCAATTTT AAAATGATAATCAGTTCACTGTAGAAGCTTATTGAATTGGAGCACTAGTTTAGTGAATTACTCAACTTTTAACCAGTTCT CAACTTCTCATGATAGATTTTTTGTGAACAGTCTTGTTAAATGGTATATAGAAATAGAATATTGTCCAATGCTTGGATGC CATTTTGTATTGTTCTTCTCAGGGTTTTCTTTCATTTTACCTGCATTTACATCTGATTTTATTTTTCCTCCTGTTTTCCT CATTTTACTTGACAGGCAATCTCTGTCATGGCCAAGACTGGGTTTGCAGAATTGATTGATTTCAACCCAATTCGTGCAAC GGATGTGCAACTGCCTGCTGGTGGGACTTTTGTGATAGCTCATTCTTTGGCGGAGTCTCAGAAGGCTGTTACCGCTGCCA CTAATTATAATAATAGGGTTGTTGAATGCCATTTGGCTTCTGTAAGTTCATTTAAACCTTATTGGTGTTGCTAGTTGTAC TCTGTACTCACTCCTTAAATACTCCTCTGGTGCAAAGCATTTCGATTACCCTATTTTATGTAGCCTTTCAGAGTACTCAA TTGTTGGATGGTAATGCATAAATATATTGGTGGTGTCTTCTTTTCTCTCTGTCTTTTGGTATAATGACAGCATGATGACT TAAACCTGTGACTTATTGTAAACTACCAAAACCATGCAGTCCACTCCTAATAACCTTGGCTGGTCTATTATATTTAACTC ATGTAACTTTCTTCATATTTTGGAATCTAAAATATTACAAATTTCTATTGTTGAACAAGAAAAACAATACATGTTCATTT TAGATACTTGGGGTCGTTTGTGTTCGAGTGAATAATTGTTTACATGTGTATATGTGCATACGTCAATAGCCAGTTGCTTA GGTGGACATGAAACTTGGTTATCCTTTTGTGTTATCAACTATATTTATTAACACACAAAGTACTATCGTGAAATTTTCCA GATTGTGCTTGCTATAAAGCTAGGAATGGAACCAGAAGAAGCAATATCAAAAGTGAAAACACTATCCGACGTTGAAGGGT TGTGTGTAGCATTTGCTGGTACTCAGAACTCATCGGATCCTGTACTTGCCGTGAAGGTAATTTTCCCCAGTATTATGCCG TCCTTAAAATTAGCCTGGTGAAACATGGCATCTCTTGAAGACGATATTTTATATTTCCGCTCCTATTTTAAAAACCTTCC TTTTGGTGCAGGAATATCTGAAAGAAGAACCATATACAGCTGAAGAAATTGAAGAAGTTACTGGCCAAAAGTTAACTTCA TTTTTGAACATTAATGCATCTTATTTGGCAGTCATACAAGCTGCAAAGCAATACAAATTACATCAGGTTTTTTTTCTTAT CCCTGTTAGCGATGGTTTCATGTATGAGTTATGTTGAAATCCAATTAGGAAATATCAAAAAAAAAAAATCTTGTGGCTTA TGTATTTCACCATTGCCAACAACCATTTCCATTGGTTGCAATGGCTAATAATATATTTGCCTCTTTATTTTCTTTTATTT AATTTGACTAATGTGTTTCTAGAGAGCTGCGCACGTGTATTCAGAAGCCAGGAGAGTACATGCTTTCAAGGATGTTGTAT CATCAAATCTAAGGTGTCTGCTGGATCCATCATAAATAGCTATGCTTATCATGTTGATCTCTTGTATTTTTATTTGATTC TCATGATACATATCTGTACTGCTTAGAATCTGGGAGTTAATAGTTTCTAGGATAGTCGGTTGAGGATTTAATTGTTAGTA GGTAAGAGGATAAAAACTAATCCTTGAAGAGTAATTTTAATCCATGAAAATTTCGGTTAAAGGTTATTGAAATTTGGAAC AGTCTGATTGAACATCTCTATTGTACCAGGTGCATGCAGCTATTTTTTGCTTTCACATGAACATTATCTGATTGCAATAT GTGGCTTTCCTATCATGCTTCTTGAACTTGATGGATCTTAAATGGTTGGCTTTTGAGCTTTTTATGTTATTGTGACATTA CGACATAATGCCAAACCCTTTCAAATGTTAACAGTTCCACATCTTGCTACTTCCATTCATGCCTGTCCTAGCTTGAGTCT TACTGATATGCACATTGCATAATTCAGTTAGTCTAGCATGTATGATGGATGAGTACGTCTCTGAATTTTTCTTAGTATGA TTCTTAGTACATGACGGGGGTGAAAGCTAATTTATATTATTGTAAAAAAAGGAAAACATTGTGCTATAAAGCTCCCTCTA TGCGCGAGGTCCAGGGAGGTGCATGATGCACTTTGTGAATCTACAGTAGACAGTCTTATCTTGCATTTTTGCAAGATGCT GATTCCACGGATCAAAGCTGTGACCGTAAAGTCACATGGCAACAACCTTACCGTTGCACCTCAAAGTCACAAGTCAAATT AGTTTATATTATTCTAATTTCACAAAAAATTATCTTAAGGACTAACTTAGTTTATTTTAGATTCTTCTGTAAGTGGCTAT ATGTTCTTTGATTCTAACATCTCAACTTTTTTCAGTGACGAGGAGAAGCTAATGAAACTCGGTGACCTTATGAACGAGAG TCATTATAGCTGCAGTGTTTTATATGAATGCAGGTATTGTATTGACATATTATTACTTCCAGAATGCTTTCTTTCATTGG GAAAAACATGTGCATTGTCAATTTTTGAATTCTCTCTAGAAAGATTCTCGTTCTGTAAGGCATGATTTATCATGTGAGCT TTTACAGCCTTAAAATAACAGAATGAAGAGTAATTCTTGTAAATTTTACTCTCCTTTTTCAGCATATAAAATTCATAATT TCTTTTTATTATTCATTGAATCAGCTGTCCGGAGTTGGAAGAACTTGTAAATATTTGCCGTGACAACGGTGCTCTCGGAG CAAGGCTTACCGGCGCCGGGTGGGGCGGTTGTGCTGTTGCTTTGGTGAAAGAGAGCATAGTCCCACAATTTATCCTTAAT TTGAAGGTTTGAGATCATACAATAAATAATTCATACTTAACAAACCTTAATCATTGGAAATTTGGAATTAACAAGTTGTC ATTGATGGATTCTTTGTCCATTGCAGGAAGGTTTCTACCAATCTAGGATGGACAAGGGCGTTATTAAGAAGAACGATCTT GGCCTTTATGTATTTGCTTCCAAGCCATCAAGTGGTGCTGCTATCATCAAGTTTTAG
CDS sequence (LotjaGi4g1v0332900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAAACACGAGGAGCTTCCGATCCCGATTTACGAGAACCTCGAAGGTGTTTACGGCGATGGTTCATCGCTCGAAGA AGCTCAGCTTCGTTTCGACAATTTGAAGTCCAAATTCATCCAATTCTTCGCTCACCCTCCTCAACTCTTCGCTCGTTCAC CAGGGAGAGTGAACTTGATCGGAGAGCATATAGACTATGAGGGTTATTCGGTTTTGCCTATGGCTATTCGCCAAGATACA ATCATCGCGATTCGGAAGAATGAAGCCGAGCCTGTTCTTAGGATCGCTAATGTTAATGATGAGAAATATGACATTTGTAC TTATCCTGCTGATCCTAACCAGGAACTTGACTTGAAGAATCACAAATGGGGCCATTACTTTATTTGTGGGTACAAAGGTT TTCATGACTATGCAAAACTGCAAGGAGTGGATGTTGGTCCACCTGTTGGGCTTGATGTTGTTGTTGATGGGACCGTGCCT ACAGGTTCCGGACTATCAAGCTCTGCGGCGTTTGTTTGTTCTTCTACAATTGCTATTATGGCTGCTTTTGATGTGAACTT CCCAAAGAAAGAAATTGCACAAGTCACATGTGACTGTGAACGACATATTGGGACACAATCTGGTGGGATGGATCAGGCAA TCTCTGTCATGGCCAAGACTGGGTTTGCAGAATTGATTGATTTCAACCCAATTCGTGCAACGGATGTGCAACTGCCTGCT GGTGGGACTTTTGTGATAGCTCATTCTTTGGCGGAGTCTCAGAAGGCTGTTACCGCTGCCACTAATTATAATAATAGGGT TGTTGAATGCCATTTGGCTTCTATTGTGCTTGCTATAAAGCTAGGAATGGAACCAGAAGAAGCAATATCAAAAGTGAAAA CACTATCCGACGTTGAAGGGTTGTGTGTAGCATTTGCTGGTACTCAGAACTCATCGGATCCTGTACTTGCCGTGAAGGAA TATCTGAAAGAAGAACCATATACAGCTGAAGAAATTGAAGAAGTTACTGGCCAAAAGTTAACTTCATTTTTGAACATTAA TGCATCTTATTTGGCAGTCATACAAGCTGCAAAGCAATACAAATTACATCAGAGAGCTGCGCACGTGTATTCAGAAGCCA GGAGAGTACATGCTTTCAAGGATGTTGTATCATCAAATCTAAGTGACGAGGAGAAGCTAATGAAACTCGGTGACCTTATG AACGAGAGTCATTATAGCTGCAGTGTTTTATATGAATGCAGCTGTCCGGAGTTGGAAGAACTTGTAAATATTTGCCGTGA CAACGGTGCTCTCGGAGCAAGGCTTACCGGCGCCGGGTGGGGCGGTTGTGCTGTTGCTTTGGTGAAAGAGAGCATAGTCC CACAATTTATCCTTAATTTGAAGGAAGGTTTCTACCAATCTAGGATGGACAAGGGCGTTATTAAGAAGAACGATCTTGGC CTTTATGTATTTGCTTCCAAGCCATCAAGTGGTGCTGCTATCATCAAGTTTTAG
Protein sequence (LotjaGi4g1v0332900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKHEELPIPIYENLEGVYGDGSSLEEAQLRFDNLKSKFIQFFAHPPQLFARSPGRVNLIGEHIDYEGYSVLPMAIRQDT IIAIRKNEAEPVLRIANVNDEKYDICTYPADPNQELDLKNHKWGHYFICGYKGFHDYAKLQGVDVGPPVGLDVVVDGTVP TGSGLSSSAAFVCSSTIAIMAAFDVNFPKKEIAQVTCDCERHIGTQSGGMDQAISVMAKTGFAELIDFNPIRATDVQLPA GGTFVIAHSLAESQKAVTAATNYNNRVVECHLASIVLAIKLGMEPEEAISKVKTLSDVEGLCVAFAGTQNSSDPVLAVKE YLKEEPYTAEEIEEVTGQKLTSFLNINASYLAVIQAAKQYKLHQRAAHVYSEARRVHAFKDVVSSNLSDEEKLMKLGDLM NESHYSCSVLYECSCPELEELVNICRDNGALGARLTGAGWGGCAVALVKESIVPQFILNLKEGFYQSRMDKGVIKKNDLG LYVFASKPSSGAAIIKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 495 | 484 | 7.7E-219 | – | |
| PANTHER | 12 | 495 | 484 | 7.7E-219 | – | |
| PIRSF | 23 | 497 | 475 | 9.4E-137 | ||
| SUPERFAMILY | 27 | 240 | 214 | 6.15E-55 | ||
| TIGRFAM | 34 | 469 | 436 | 4.0E-86 | ||
| Gene3D | 36 | 494 | 459 | 1.9E-157 | ||
| Pfam | 38 | 86 | 49 | 7.2E-22 | ||
| PRINTS | 53 | 77 | 25 | 7.4E-39 | – | |
| ProSitePatterns | 55 | 66 | 12 | - | ||
| PRINTS | 55 | 73 | 19 | 1.4E-19 | ||
| PRINTS | 150 | 168 | 19 | 1.4E-19 | ||
| Pfam | 152 | 217 | 66 | 1.7E-13 | ||
| PRINTS | 157 | 179 | 23 | 7.4E-39 | – | |
| ProSitePatterns | 159 | 170 | 12 | - | ||
| PRINTS | 199 | 218 | 20 | 7.4E-39 | – | |
| Gene3D | 241 | 489 | 249 | 1.9E-157 | – | |
| SUPERFAMILY | 243 | 472 | 230 | 1.28E-38 | ||
| Gene3D | 259 | 414 | 156 | 1.9E-157 | ||
| PRINTS | 364 | 378 | 15 | 1.4E-19 | ||
| Pfam | 394 | 465 | 72 | 1.3E-13 | ||
| PRINTS | 432 | 449 | 18 | 7.4E-39 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Galactokinase activity | Catalysis of the reaction: D-galactose + ATP = alpha-D-galactose 1-phosphate + ADP + 2 H(+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Galactose binding | Interacting selectively and non-covalently with the aldohexose galactose (galacto-hexose), a common constituent of many oligo- and polysaccharides. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Galactose metabolic process | The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose. | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. | ||
| Molecular function | Phosphotransferase activity, alcohol group as acceptor | Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor). | ||
| Biological process | Carbohydrate phosphorylation | The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y. |
Expression pattern of LotjaGi4g1v0332900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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