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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019906
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.620s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0091599.1
n.a. PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 1 [Glycine max] gi|356559805|ref|XP_003548187.1| chr0 37947121 37949778 +
4 domain predictions
4 GO terms
Lj2g3v1415100.1
n.a. PREDICTED: 60S ribosomal protein L6, mitochondrial-like [Cucumis sativus] gi|449451529|ref|XP_004143514.1| chr2 22293018 22294612 +
2 domain predictions
4 GO terms
LotjaGi2g1v0143100.1
n.a. 50S ribosomal protein L6; TAIR: AT1G05190.1 Ribosomal protein L6 family; Swiss-Prot: sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic; TrEMBL-Plants: tr|I1MPT8|I1MPT8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0143100 LjG1.1_chr2 51942826 51945497 -
5 domain predictions
4 GO terms
LotjaGi2g1v0143100.2
n.a. 50S ribosomal protein L6; TAIR: AT1G05190.1 Ribosomal protein L6 family; Swiss-Prot: sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic; TrEMBL-Plants: tr|I1MPT8|I1MPT8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0143100 LjG1.1_chr2 51943156 51944565 -
5 domain predictions
4 GO terms
LotjaGi2g1v0322400.1
n.a. 50S ribosomal protein L6, putative; TAIR: AT2G18400.1 ribosomal protein L6 family protein; Swiss-Prot: sp|P26861|RM06_MARPO 60S ribosomal protein L6, mitochondrial; TrEMBL-Plants: tr|I3SVR1|I3SVR1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0322400 LjG1.1_chr2 79718580 79718888 +
2 domain predictions
4 GO terms
LotjaGi2g1v0322700.1
n.a. 50S ribosomal protein L6, putative; TAIR: AT2G18400.1 ribosomal protein L6 family protein; Swiss-Prot: sp|P26861|RM06_MARPO 60S ribosomal protein L6, mitochondrial; TrEMBL-Plants: tr|I3SVR1|I3SVR1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0322700 LjG1.1_chr2 79754853 79755161 +
2 domain predictions
4 GO terms
LotjaGi6g1v0283300.1
n.a. 50S ribosomal protein L6, putative; TAIR: AT2G18400.1 ribosomal protein L6 family protein; Swiss-Prot: sp|P26861|RM06_MARPO 60S ribosomal protein L6, mitochondrial; TrEMBL-Plants: tr|I3SVR1|I3SVR1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0283300 LjG1.1_chr6 59988425 59990191 -
2 domain predictions
4 GO terms