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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR020556
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.378s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v2833050.1
n.a. PREDICTED: fatty acid amide hydrolase-like isoform X2 [Cicer arietinum] gi|502139767|ref|XP_004503894.1| chr4 37988407 37995108 +
2 domain predictions
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Lj5g3v1484550.1
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356576771|ref|XP_003556503.1| chr5 21616467 21620751 +
2 domain predictions
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Lj5g3v1484550.2
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356576771|ref|XP_003556503.1| chr5 21616467 21620751 +
2 domain predictions
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Lj6g3v0922040.1
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial-like isoform X1 [Cicer arietinum] gi|502128559|ref|XP_004500003.1| chr6 9573550 9578231 -
2 domain predictions
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Lj6g3v2182060.1
n.a. PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like [Glycine max] gi|356554842|ref|XP_003545751.1| chr6 25192025 25196247 -
2 domain predictions
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LotjaGi4g1v0413100.1
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT5G64440.1 fatty acid amide hydrolase; Swiss-Prot: sp|Q7XJJ7|FAAH_ARATH Fatty acid amide hydrolase; TrEMBL-Plants: tr|A0A151R6Z3|A0A151R6Z3_CAJCA Glutamyl-tRNA(Gln) amidotransferase subunit A; Found in the gene: LotjaGi4g1v0413100 LjG1.1_chr4 78874587 78882527 +
2 domain predictions
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LotjaGi5g1v0220000.1
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT1G08980.1 amidase 1; Swiss-Prot: sp|Q9FR37|AMI1_ARATH Amidase 1; TrEMBL-Plants: tr|I1NIY1|I1NIY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0220000 LjG1.1_chr5 52641023 52649524 +
2 domain predictions
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LotjaGi6g1v0171200.1
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT3G25660.1 Amidase family protein; Swiss-Prot: sp|Q9LI77|GATA_ARATH Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7IZY8|G7IZY8_MEDTR Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Found in the gene: LotjaGi6g1v0171200 LjG1.1_chr6 45794241 45799713 -
2 domain predictions
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LotjaGi6g1v0347100.1
n.a. Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT5G64440.1 fatty acid amide hydrolase; Swiss-Prot: sp|Q7XJJ7|FAAH_ARATH Fatty acid amide hydrolase; TrEMBL-Plants: tr|I1ME34|I1ME34_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0347100 LjG1.1_chr6 65983791 65992741 -
2 domain predictions
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