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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0171200 |
| Transcript ID | LotjaGi6g1v0171200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutamyl-tRNA(Gln) amidotransferase subunit A; TAIR: AT3G25660.1 Amidase family protein; Swiss-Prot: sp|Q9LI77|GATA_ARATH Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7IZY8|G7IZY8_MEDTR Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial; Found in the gene: LotjaGi6g1v0171200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:45794241..45799713) extracted from Lotus japonicus Gifu genome v1.2.
ATCACGAACAGTATATATCAGTTTCACTCTATCATTGGTTCAGTCAGAGTGAGTGACACTCGCACAGTGGTGGTGAGTGG AAAACGCAAACGAAAATGCTATCCACACTTCAAACCCCTCGCTCCCTCTCTCTCTCACGCTTCTCCTTCCTTCCTTCAAC CTCAAACCCCTTCACTCTCCCTTCCTCCACCTTCAACTTCACTTCCACCACTCTCCCTCAAGCTTCCCTCACCGACCACC AATCCCCAACCACCACCACCACTTCACCGCCGCAATCCCAGATCCTCTCCACCCGCCACTCCCTCCTCTCCCGCCACCTC ACCGCCACCGACCTCGTCCACTCCCACCTCGCCCGCCTCCACCTCTCCGAACCCCACCTCCGCTCCTTCCTCCACCTCCC CGATGACGACTCCCTCCTCTCCCGTGCCCGTGACCTCGACGCCAGAATCGCCGCTGGTGAAGACCCTGGCCCTCTCGCCG GCGTCCTTGTTGCCGTCAAGGATAATATCTGCACTGCTGACATGCCATCCACCGGCGGCTCCCGTATCCTTGATGGTTAC CGCCCGCCCTTCGATGCCACTGCTGTCAAGAGAGTGAAGGAGTTGGGTGGCATCGTTGTTGGCAAGACCAATTTAGATGA GTTTGGTATGGGTAGCACCACTGAAGCCTCTGCATTTCAGGTTTTTCTTCTCTTTTGGTCAATGCCCAGTTTGTATTATT AGTAATGAATGTGATAGGAGATGACTTTATGTGTTTAGAAGTTGAGTTGTTGATTGATTGCCTCTTTGTTTGGTAGAGAA AATGATGACATAAATGAAACTTGTCTCAGTGAATGACATGGTGAAAACTTGCATTGATGTTTGCTAATTTTTGTTTTTTG GATATTACAAAATAAAAACAAAGTGTGTTGATATCAGTGTTGTTAATTGCGGATGGCGGGTCATGGCAGAAAGCCAAAAT CTCGCCATACATGACAAATAATGACGGAAAGCCAAAAAACCGCCATGAGAAACTGCCATGGTGGAGTGGCCCTTCCTGTG GGTTGGCTAGGCTTTTATTGTGTTTGGTTTCTAGCTTTGTTACTTTTATCGCCTATTTATTTATAACTGGGATTGGTTTA CTCAGGTGGTGCATATGTTCATTCAATAGGTGACTGCCAACCCATGGGATGTTTCTAGGGTGCCGGGAGGATCATCAGGA GGATCAGCTGCTGCAGTTTCTGCAAGGCAGTGTGTTGTATCTTTGGGAAGTGATACTGGTGGAAGCGTGAGGCAGCCAGC GTCATTTTGTGGTGTTGTAGGTTTGAAGCCGACATATGGGCGTGTGTCGAGATTTGGACTCATGGCGTATGCATCATCGC TTGATGCCATTGGTTGTTTTGGTTCATCGGTTGCTGATGCGGGGATTCTCCTTCATGCTATTGCTGGTCATGATAGATTT GATGCCACCTCAAGTAAGCAGGTATGAGTTCTTCACCATGTGTGATATAATCGTAGTGACGATCTAGTTTCTCAATAAGA TGGGTAATTGGTGAAATCATTGCAATTGTATATTTATTTCTTGTTATTAAGCCAATTTGTTTCTAATAATGAATAATTCC TTTTGTCAGGATGTACCCAACTTTCTATCTAATTTTGTCCCTGCAAGCTCCTTGGAAAGTAAGCCCTTGAAGGGACTGAA AGTTGGTCTGATCCGTGAAACTATTGACGAGGGTGTAGATGCTGGAGTAATTTCCGCAGTTCGTGCTGCTGCTTTGCATT TTGAGGAATTAGGATGCTCTGTGAATGAGGTTCTTTGCATCATTTAAGACTGTATCTATAATTCTGAACCACATAATAAC TTTTTTCTATTCTATAGTAGGTTTACCAATTTATATTACTACAGTTTATATCCTTAGTATGTCTGTTTCATTAGTCCATC AACTTACAGGTCTCACTGCCATCCTTTTCCCTTGGATTGCCTGCATACTATATCCTTGCGTTGTCTGAGTCATCTTCCAA CTTGTCACGCTATGATGGTATTAGGTCAGCTGATGCCTCTCCTGTCCACCCTCTCCATTCAACATACACACAAATCACCA TAATAACTCATTTATGTTCTTTATTATTTTCATGGATAGACCCACTTAGCCTGTCGAGCCTTTTTATCTATTTAGGTATG GAAACCAAGTTTATGCTGATGAGCTAGACTCTCTTTATGGAGATTCTCGAGCTAAAGGACTTGGTTCTGAGGTACATACC TTATCAATCCTTAATTTCCAGTTGGGCTTAAAGATGTTTGTTAGCTTTATATATAAATGTATAAAGAAATGTCCAACTTT ATTTGAATTAAAATTTTAAGAAATGTATAAACTATGAACGCTTTCAATTCTAATTAAATTTCAGGTCAAAATGAGAATTT TGATGGGGACATATGCTCTTTCAGCTGGTTACTATGATGCATATTACAAGCGGGCACAGCAGGTACTACTAACATGATCT ATGCCTTCACTCTTAACCTAATAGCCATGAATTAAGTTTCATAGGACTGGTTTGTTTTTACTTTAAGAAGTTCCGAGCTT CGAGATTTAATCTTTACATGATTTATGTTCAGTTTTGTTTTCTAGGTTATGTAACTAAACAGGGATACTTCTGTGGTAAA TAAAACCTTGCTTCGTTTCTTAAAATTGGCATATCAATGTTCTGCGTTTCATCTTCATCTGGACACCAGTGTTTTAGGAT CTTCAAGATATTTGCTTGTTATGTTACAGGTGAGAACCATAATAAAGAATAGCTTTAAGGAGGCACTGAGTCAAAATGAC ATTCTGATTTCCCCTGCAGCTCCTTCTGCTGCTTATAAAATCGGTAAGTATCTACATCTCTTTGCTTTTTCATTATTGTG CATTAGTGCCCGCTGTGTTAATTGTTTTATTTTCCAGGTGAAAAGAAAAACGATCCTTTGGCTATGTATGCAGGTGACAT CATGACCGTAAGTATTTCACTCTTCTTTTTAGCTAGATTTCTGTCTCAAGTTTTTTATAATATGTGAATCAGACTAACAG TGTCAGTACGTGGTCTTAGACTTAGACTTATGCTATTGAACTTCTTCAGCTCCACTGAGCTCAAATAAAGCTTGGATAGC TGTGAGCCCTTGAGCAGACCACGAATCTGCTTGTGATCATATTTGGTTAAAATTGTAGGTTATGTTTTAGATATTAAACC TAACTGGTCCAAGAAGTTTTAGATACTAAACCTAACTGGTCCAAGAATGGCCTTCGCTAATCATTAACTGCAGGGTTGGT TGCACTGCATGAGTTTGTTCTCAGCATGTGGCAAGTATATAATGTTGTCAGTTCTAGTCGCTCCACAAGGGAATTTCCTA GTGGAAATGGAATTAAGTCACCATTGAATGCAATGATGCACCCAATGGTTAAGAGTTTCATCTTCTGTGTGTATTGTCTG AAGTTTCATTTCTAGCTACATCTGTTTGCCCTTGTTCATTGGTGTTTCTTTTAACAGGTAAATGTTAACCTAGCTGGACT ACCTGCCTTGGTTTTGCCATGTGGATTTGTTGAGGGCGGCTCGGCAGGCCTTCCTGTTGGCCTACAAATGATTGGTGGAG CATTTGATGAGGTACTTTCCTACTTACTGCACTGGACTTCTTGTCGATTGAATTTCTCTATGTTGCCTCTAGTTTCGTTC TAACTGTTAGTCTTCATTTCTTACAAATATGAAAGAGGGAGATGGTGATAGTATAGAAGATTTTTGGCTTTATTTTGAAG ATGACTACATAAAATCATGGATCGAAAAATAAGGACATTAAAGGGTTAGGGTTAATGTAAAGTTCTGCAGAATTTGGTCC CTTTGATTTTGGTTTCTTTCCTCTCTTTCTCTGGGGCGGTTCAAAGGTTCTTATTCCAAAATTCTTCATTTGTTTGAGCA TGGCTTTTATGTCATATGCATGAATTTTGTATTGAAAACACCTACTCAAGTGGGTATGTTGTAAGATAAGTCAAAACAAG CTTCAAAAAAGCTCTTTCAAACACCCCTTATGACTTGTATTGTACATACCGTTACCCATACTTATCATTATCAAACAAAG TACTTGTCATTATGAACTTCTTGTATTTTGGCATGTGTTTTTTTAAGAAAAAAAGTAATTTAGAACTTTGTTTTATGTCA CTCTGGATTTTGGAACCCTTTCAAATCTATAAAGGGAAGAATATTGAAACTGGAAACACAAAGGTATTTTCTTGCTACTG CTAGTCTGCTACAGTTGCTAGTAAAGACTTTCTGAACTACATGTGGATCAAGCGTACTATTTTGTCCTATTTGCTTAATT TTCTTGTTTATATAAAAATTAGGGATGTTTTGAGCTAAGACCATTCGACATTTTTAACGGAAGATACAGTTTGCCAGTAT GATTTCCTTTGCATTAAAAAAAAACTATATGGTGAAAGTGAGCTATGTGGTTGGCTGGTCGCACTGATAATTTTGAATGC AAAATTTGGGCCTTAGGGTTTTGGGGAATAAAATGTCTAATGAATATATGTGAAATAAGTGCTATGTTTTAACTGAAACA AAAAATAAAATGTGCTATGCATTTTCTTACTAGTTTTGCATGAGATAATGTGCAGGACTATATTTTTGACACTGAACTCT ATGGCTGGGAATTTAATTGCAGGGAGAACTGCTAAGAGTGGGACATATCTTTGAGCAAACTCTTGGAAATGGCAGCTTTG TTCCACCAATTGTAGCGGATAACATTGCATGCTGAGAATAAGGGCTTATTTTTCATCTTGGTTATTGATAAATATTTTCG TTAGTTTCATGTAATGTGGTTGGCAGAAGCAGGTATTTTTGTATTTTTAGATTGTTCAGAATGTGCTAGTTGGATTCAAA ATAGTAAATTTAAGGAGAACATGATTTTGATTCTTGACACAGGTTATATACTCATGTTTTCCTCAGTCGTCACACGGCAG AAACTATGTTCAGTGTGCTTGAAAGTTCACTCATTATGTGCAGAATGACCTTTCAAGTAGCTGATGGGGAATTTCACCAG CTATGGTTAACAACTAGTATCTACACCCGTGCTTTGCACGGTTAGATTTTGTGGTTAATACTATGCACAGATAGTAGCAA AACAAACATTTTTCATTCAAACATAATAAACACGTAGCAACATTGTCGATTAAACATTACAGAAACCCAAATTTTAAATA ACAGTTGTCCAACAAACGATAGAAAGCACTTCCTACAACTAACTAATAAGCCAGTGAGCCTGAAGAGTACCAACCATTGT GTCACAACTAATGGTGGAATAGAACATCAACAACACCTATAGCTTCACTGGTTAAAAAAAAGGACAACACATCCCCAGCC TTCAATTGATGTGCGTTGCAAAATGCTTTCCAACCCCTACCAAACTTCGCATATTTCCTGACAGGCACGCCAAGTATGGT GCAATCTACTTGCGTTCCAGAAGGCCCTCTCAA
CDS sequence (LotjaGi6g1v0171200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTATCCACACTTCAAACCCCTCGCTCCCTCTCTCTCTCACGCTTCTCCTTCCTTCCTTCAACCTCAAACCCCTTCAC TCTCCCTTCCTCCACCTTCAACTTCACTTCCACCACTCTCCCTCAAGCTTCCCTCACCGACCACCAATCCCCAACCACCA CCACCACTTCACCGCCGCAATCCCAGATCCTCTCCACCCGCCACTCCCTCCTCTCCCGCCACCTCACCGCCACCGACCTC GTCCACTCCCACCTCGCCCGCCTCCACCTCTCCGAACCCCACCTCCGCTCCTTCCTCCACCTCCCCGATGACGACTCCCT CCTCTCCCGTGCCCGTGACCTCGACGCCAGAATCGCCGCTGGTGAAGACCCTGGCCCTCTCGCCGGCGTCCTTGTTGCCG TCAAGGATAATATCTGCACTGCTGACATGCCATCCACCGGCGGCTCCCGTATCCTTGATGGTTACCGCCCGCCCTTCGAT GCCACTGCTGTCAAGAGAGTGAAGGAGTTGGGTGGCATCGTTGTTGGCAAGACCAATTTAGATGAGTTTGGTATGGGTAG CACCACTGAAGCCTCTGCATTTCAGGTGACTGCCAACCCATGGGATGTTTCTAGGGTGCCGGGAGGATCATCAGGAGGAT CAGCTGCTGCAGTTTCTGCAAGGCAGTGTGTTGTATCTTTGGGAAGTGATACTGGTGGAAGCGTGAGGCAGCCAGCGTCA TTTTGTGGTGTTGTAGGTTTGAAGCCGACATATGGGCGTGTGTCGAGATTTGGACTCATGGCGTATGCATCATCGCTTGA TGCCATTGGTTGTTTTGGTTCATCGGTTGCTGATGCGGGGATTCTCCTTCATGCTATTGCTGGTCATGATAGATTTGATG CCACCTCAAGTAAGCAGGATGTACCCAACTTTCTATCTAATTTTGTCCCTGCAAGCTCCTTGGAAAGTAAGCCCTTGAAG GGACTGAAAGTTGGTCTGATCCGTGAAACTATTGACGAGGGTGTAGATGCTGGAGTAATTTCCGCAGTTCGTGCTGCTGC TTTGCATTTTGAGGAATTAGGATGCTCTGTGAATGAGGTCTCACTGCCATCCTTTTCCCTTGGATTGCCTGCATACTATA TCCTTGCGTTGTCTGAGTCATCTTCCAACTTGTCACGCTATGATGGTATTAGGTATGGAAACCAAGTTTATGCTGATGAG CTAGACTCTCTTTATGGAGATTCTCGAGCTAAAGGACTTGGTTCTGAGGTCAAAATGAGAATTTTGATGGGGACATATGC TCTTTCAGCTGGTTACTATGATGCATATTACAAGCGGGCACAGCAGGTGAGAACCATAATAAAGAATAGCTTTAAGGAGG CACTGAGTCAAAATGACATTCTGATTTCCCCTGCAGCTCCTTCTGCTGCTTATAAAATCGGTGAAAAGAAAAACGATCCT TTGGCTATGTATGCAGGTGACATCATGACCGTAAATGTTAACCTAGCTGGACTACCTGCCTTGGTTTTGCCATGTGGATT TGTTGAGGGCGGCTCGGCAGGCCTTCCTGTTGGCCTACAAATGATTGGTGGAGCATTTGATGAGGGAGAACTGCTAAGAG TGGGACATATCTTTGAGCAAACTCTTGGAAATGGCAGCTTTGTTCCACCAATTGTAGCGGATAACATTGCATGCTGA
Protein sequence (LotjaGi6g1v0171200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSTLQTPRSLSLSRFSFLPSTSNPFTLPSSTFNFTSTTLPQASLTDHQSPTTTTTSPPQSQILSTRHSLLSRHLTATDL VHSHLARLHLSEPHLRSFLHLPDDDSLLSRARDLDARIAAGEDPGPLAGVLVAVKDNICTADMPSTGGSRILDGYRPPFD ATAVKRVKELGGIVVGKTNLDEFGMGSTTEASAFQVTANPWDVSRVPGGSSGGSAAAVSARQCVVSLGSDTGGSVRQPAS FCGVVGLKPTYGRVSRFGLMAYASSLDAIGCFGSSVADAGILLHAIAGHDRFDATSSKQDVPNFLSNFVPASSLESKPLK GLKVGLIRETIDEGVDAGVISAVRAAALHFEELGCSVNEVSLPSFSLGLPAYYILALSESSSNLSRYDGIRYGNQVYADE LDSLYGDSRAKGLGSEVKMRILMGTYALSAGYYDAYYKRAQQVRTIIKNSFKEALSQNDILISPAAPSAAYKIGEKKNDP LAMYAGDIMTVNVNLAGLPALVLPCGFVEGGSAGLPVGLQMIGGAFDEGELLRVGHIFEQTLGNGSFVPPIVADNIAC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 14 | 14 | - | – | |
| MobiDBLite | 43 | 63 | 21 | - | – | |
| PANTHER | 60 | 546 | 487 | 5.1E-201 | – | |
| Gene3D | 60 | 545 | 486 | 1.4E-175 | ||
| PANTHER | 60 | 546 | 487 | 5.1E-201 | ||
| SUPERFAMILY | 63 | 549 | 487 | 1.57E-143 | ||
| Hamap | 66 | 543 | 478 | 88.396 | ||
| TIGRFAM | 69 | 542 | 474 | 1.9E-171 | ||
| Pfam | 79 | 532 | 454 | 1.0E-139 | ||
| ProSitePatterns | 208 | 239 | 32 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Amidase activity | Catalysis of the reaction: a monocarboxylic acid amide + H2O = a monocarboxylate + NH3. | ||
| Biological process | Translation | The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. | ||
| Cellular component | Glutamyl-tRNA(Gln) amidotransferase complex | A protein complex that possesses glutamyl-tRNA(Gln) amidotransferase activity, and therefore creates Gln-tRNA by amidating Glu-tRNA; usually composed of 3 subunits: A, B, and C. Note that the C subunit may not be required in all organisms. | ||
| Molecular function | Glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | Catalysis of the reaction: L-glutamine + glutamyl-tRNA(Gln) + ATP = L-glutamate + glutaminyl-tRNA(Gln) + phosphate + ADP. |
Expression pattern of LotjaGi6g1v0171200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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