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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR020586
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.576s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0054159.1
n.a. photosystem I P700 chlorophyll a apoprotein A2 [Lotus japonicus] gi|13518429|ref|NP_084789.1| chr0 17347249 17351519 -
2 domain predictions
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Lj3g3v0290200.1
n.a. photosystem I P700 chlorophyll a apoprotein A2 [Lotus japonicus] gi|13518429|ref|NP_084789.1| chr3 1892759 1894147 +
2 domain predictions
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LotjaGi3g1v0022000.1
n.a. Photosystem I P700 chlorophyll a apoprotein A2; TAIR: ATCG00340.1 Photosystem I, PsaA/PsaB protein (ChrC); Swiss-Prot: sp|P58385|PSAB_LOTJA Photosystem I P700 chlorophyll a apoprotein A2; TrEMBL-Plants: tr|A0A178W009|A0A178W009_ARATH PSAB; Found in the gene: LotjaGi3g1v0022000 LjG1.1_chr3 2381843 2383871 +
2 domain predictions
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LotjaGi3g1v0022000.2
n.a. Photosystem I P700 chlorophyll a apoprotein A2; TAIR: ATCG00340.1 Photosystem I, PsaA/PsaB protein (ChrC); Swiss-Prot: sp|P58385|PSAB_LOTJA Photosystem I P700 chlorophyll a apoprotein A2; TrEMBL-Plants: tr|A0A178W009|A0A178W009_ARATH PSAB; Found in the gene: LotjaGi3g1v0022000 LjG1.1_chr3 2381859 2383871 +
2 domain predictions
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LotjaGi3g1v0022000.3
n.a. Photosystem I P700 chlorophyll a apoprotein A2; TAIR: ATCG00340.1 Photosystem I, PsaA/PsaB protein (ChrC); Swiss-Prot: sp|P58385|PSAB_LOTJA Photosystem I P700 chlorophyll a apoprotein A2; TrEMBL-Plants: tr|A0A178W009|A0A178W009_ARATH PSAB; Found in the gene: LotjaGi3g1v0022000 LjG1.1_chr3 2381973 2383871 +
2 domain predictions
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LotjaGi3g1v0022000.4
n.a. Photosystem I P700 chlorophyll a apoprotein A2; TAIR: ATCG00340.1 Photosystem I, PsaA/PsaB protein (ChrC); Swiss-Prot: sp|P58385|PSAB_LOTJA Photosystem I P700 chlorophyll a apoprotein A2; TrEMBL-Plants: tr|A0A0K0LWC0|A0A0K0LWC0_9FABA Photosystem I P700 chlorophyll a apoprotein A2; Found in the gene: LotjaGi3g1v0022000 LjG1.1_chr3 2381974 2383871 +
2 domain predictions
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