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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR020783
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.608s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v3085570.1
n.a. PREDICTED: 60S ribosomal protein L12-like [Cicer arietinum] gi|502121944|ref|XP_004497502.1| chr3 38638718 38640177 +
4 domain predictions
3 GO terms
Lj5g3v0629140.1
n.a. PREDICTED: 60S ribosomal protein L12-like [Glycine max] gi|356548248|ref|XP_003542515.1| chr5 8616737 8618252 -
4 domain predictions
3 GO terms
Lj6g3v0227420.1
n.a. Plastid ribosomal protein l11 [Theobroma cacao] gi|508776569|gb|EOY23825.1| chr6 2633366 2635939 -
4 domain predictions
3 GO terms
Lj6g3v1038740.1
n.a. PREDICTED: 54S ribosomal protein L19, mitochondrial-like [Cicer arietinum] gi|502149042|ref|XP_004507370.1| chr6 11599927 11600780 -
4 domain predictions
3 GO terms
LotjaGi2g1v0359600.1
n.a. 50S ribosomal protein L11; TAIR: AT2G37190.1 Ribosomal protein L11 family protein; Swiss-Prot: sp|O50003|RL12_PRUAR 60S ribosomal protein L12; TrEMBL-Plants: tr|V4UR62|V4UR62_9ROSI Uncharacterized protein; Found in the gene: LotjaGi2g1v0359600 LjG1.1_chr2 85694770 85697858 +
2 domain predictions
3 GO terms
LotjaGi2g1v0359600.2
n.a. 50S ribosomal protein L11; TAIR: AT2G37190.1 Ribosomal protein L11 family protein; Swiss-Prot: sp|O50003|RL12_PRUAR 60S ribosomal protein L12; TrEMBL-Plants: tr|M0REW8|M0REW8_MUSAM Uncharacterized protein; Found in the gene: LotjaGi2g1v0359600 LjG1.1_chr2 85694885 85695385 +
2 domain predictions
3 GO terms
LotjaGi2g1v0359600.3
n.a. 50S ribosomal protein L11; TAIR: AT2G37190.1 Ribosomal protein L11 family protein; Swiss-Prot: sp|O50003|RL12_PRUAR 60S ribosomal protein L12; TrEMBL-Plants: tr|V4UR62|V4UR62_9ROSI Uncharacterized protein; Found in the gene: LotjaGi2g1v0359600 LjG1.1_chr2 85694885 85695528 +
2 domain predictions
3 GO terms
LotjaGi2g1v0359600.4
n.a. 50S ribosomal protein L11; TAIR: AT2G37190.1 Ribosomal protein L11 family protein; Swiss-Prot: sp|O50003|RL12_PRUAR 60S ribosomal protein L12; TrEMBL-Plants: tr|V4UR62|V4UR62_9ROSI Uncharacterized protein; Found in the gene: LotjaGi2g1v0359600 LjG1.1_chr2 85694885 85695594 +
2 domain predictions
3 GO terms
LotjaGi5g1v0078100.1
n.a. 50S ribosomal protein L11; TAIR: AT2G37190.1 Ribosomal protein L11 family protein; Swiss-Prot: sp|O50003|RL12_PRUAR 60S ribosomal protein L12; TrEMBL-Plants: tr|A5C9G0|A5C9G0_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0078100 LjG1.1_chr5 12790808 12791446 -
2 domain predictions
3 GO terms
LotjaGi5g1v0078100.2
n.a. 50S ribosomal protein L11; TAIR: AT2G37190.1 Ribosomal protein L11 family protein; Swiss-Prot: sp|O50003|RL12_PRUAR 60S ribosomal protein L12; TrEMBL-Plants: tr|K7LQG0|K7LQG0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0078100 LjG1.1_chr5 12790812 12791446 -
2 domain predictions
3 GO terms
LotjaGi5g1v0078100.3
n.a. 50S ribosomal protein L11; TAIR: AT2G37190.1 Ribosomal protein L11 family protein; Swiss-Prot: sp|O50003|RL12_PRUAR 60S ribosomal protein L12; TrEMBL-Plants: tr|M0REW8|M0REW8_MUSAM Uncharacterized protein; Found in the gene: LotjaGi5g1v0078100 LjG1.1_chr5 12790946 12791446 -
2 domain predictions
3 GO terms
LotjaGi5g1v0078100.4
n.a. 50S ribosomal protein L11; TAIR: AT2G37190.1 Ribosomal protein L11 family protein; Swiss-Prot: sp|O50003|RL12_PRUAR 60S ribosomal protein L12; TrEMBL-Plants: tr|K7LQG0|K7LQG0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0078100 LjG1.1_chr5 12790946 12791446 -
2 domain predictions
3 GO terms
LotjaGi6g1v0032300.1
n.a. 50S ribosomal protein L11; TAIR: AT1G32990.1 plastid ribosomal protein l11; Swiss-Prot: sp|Q9MAP3|RK11_ARATH 50S ribosomal protein L11, chloroplastic; TrEMBL-Plants: tr|I3S932|I3S932_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0032300 LjG1.1_chr6 6049766 6052753 -
2 domain predictions
3 GO terms
LotjaGi6g1v0195600.1
n.a. 50S ribosomal protein L11; TAIR: AT4G35490.1 mitochondrial ribosomal protein L11; Swiss-Prot: sp|Q9Y3B7|RM11_HUMAN 39S ribosomal protein L11, mitochondrial; TrEMBL-Plants: tr|T2DNZ2|T2DNZ2_PHAVU 60S ribosomal protein L19; Found in the gene: LotjaGi6g1v0195600 LjG1.1_chr6 49193985 49195270 +
2 domain predictions
3 GO terms