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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR022365
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.268s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0217139.1
n.a. PREDICTED: clathrin heavy chain 1-like [Cicer arietinum] gi|502129383|ref|XP_004500281.1| chr0 110500732 110502069 -
2 domain predictions
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Lj2g3v0877730.1
n.a. PREDICTED: clathrin heavy chain 1-like [Cicer arietinum] gi|502129383|ref|XP_004500281.1| chr2 13469043 13469774 -
2 domain predictions
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Lj2g3v2771110.1
n.a. PREDICTED: clathrin heavy chain 2-like [Cicer arietinum] gi|502097571|ref|XP_004491025.1| chr2 36584104 36602634 +
2 domain predictions
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Lj6g3v0497300.2
n.a. PREDICTED: clathrin heavy chain 1-like [Glycine max] gi|356539985|ref|XP_003538472.1| chr6 4905021 4917171 -
2 domain predictions
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LotjaGi1g1v0076400.1
n.a. Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400 LjG1.1_chr1 10987697 11007343 -
2 domain predictions
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LotjaGi1g1v0076400.3
n.a. Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400 LjG1.1_chr1 10988888 11006842 -
2 domain predictions
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LotjaGi1g1v0076400.4
n.a. Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400 LjG1.1_chr1 10988888 11006845 -
2 domain predictions
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LotjaGi1g1v0076400.5
n.a. Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400 LjG1.1_chr1 10988888 11006910 -
2 domain predictions
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LotjaGi1g1v0076400.6
n.a. Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|W8E7A2|W8E7A2_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi1g1v0076400 LjG1.1_chr1 10988888 11006910 -
2 domain predictions
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LotjaGi6g1v0076900.1
n.a. Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|X4Z1M5|X4Z1M5_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi6g1v0076900 LjG1.1_chr6 14569299 14582136 +
2 domain predictions
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LotjaGi6g1v0076900.2
n.a. Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q0WNJ6|CLAH1_ARATH Clathrin heavy chain 1; TrEMBL-Plants: tr|X4Z1M5|X4Z1M5_LOTJA Clathrin heavy chain; Found in the gene: LotjaGi6g1v0076900 LjG1.1_chr6 14569590 14581119 +
2 domain predictions
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LotjaGi6g1v0123700.1
n.a. Clathrin heavy chain; TAIR: AT3G11130.1 Clathrin, heavy chain; Swiss-Prot: sp|Q2RBN7|CLH1_ORYSJ Clathrin heavy chain 1; TrEMBL-Plants: tr|V7BP18|V7BP18_PHAVU Clathrin heavy chain; Found in the gene: LotjaGi6g1v0123700 LjG1.1_chr6 31595069 31607308 +
2 domain predictions
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