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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR022398
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.509s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0190979.1
n.a. Tripeptidyl-peptidase [Medicago truncatula] gi|357443997|ref|XP_003592276.1| chr0 93369475 93383726 -
2 domain predictions
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Lj0g3v0194349.1
n.a. PREDICTED: cucumisin-like [Glycine max] gi|356499137|ref|XP_003518399.1| chr0 94823297 94826182 +
2 domain predictions
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Lj2g3v3087930.1
n.a. PREDICTED: cucumisin-like [Glycine max] gi|356499137|ref|XP_003518399.1| chr2 39730875 39733258 -
2 domain predictions
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Lj4g3v2294420.1
n.a. PREDICTED: cucumisin-like [Glycine max] gi|356499137|ref|XP_003518399.1| chr4 31927666 31935072 +
2 domain predictions
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Lj4g3v2294420.2
n.a. PREDICTED: cucumisin-like [Glycine max] gi|356499137|ref|XP_003518399.1| chr4 31927666 31931894 +
2 domain predictions
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LotjaGi1g1v0049000.1
n.a. Subtilisin-like serine protease; TAIR: AT3G46850.1 Subtilase family protein; Swiss-Prot: sp|Q39547|CUCM1_CUCME Cucumisin; TrEMBL-Plants: tr|A0A0R0L1C5|A0A0R0L1C5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0049000 LjG1.1_chr1 6766334 6779561 -
2 domain predictions
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LotjaGi1g1v0084800.2
n.a. Subtilisin-like serine protease; TAIR: AT3G46850.1 Subtilase family protein; Swiss-Prot: sp|Q39547|CUCM1_CUCME Cucumisin; TrEMBL-Plants: tr|A0A0B2PUU1|A0A0B2PUU1_GLYSO Cucumisin; Found in the gene: LotjaGi1g1v0084800 LjG1.1_chr1 12189114 12196033 +
2 domain predictions
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LotjaGi1g1v0084800.3
n.a. Subtilisin-like serine protease; TAIR: AT3G46850.1 Subtilase family protein; Swiss-Prot: sp|Q39547|CUCM1_CUCME Cucumisin; TrEMBL-Plants: tr|A0A0R0L1C5|A0A0R0L1C5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0084800 LjG1.1_chr1 12189114 12278833 +
2 domain predictions
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LotjaGi1g1v0084800.4
n.a. Subtilisin-like serine protease; TAIR: AT3G46850.1 Subtilase family protein; Swiss-Prot: sp|Q39547|CUCM1_CUCME Cucumisin; TrEMBL-Plants: tr|A0A0R0L1C5|A0A0R0L1C5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0084800 LjG1.1_chr1 12273413 12279473 +
2 domain predictions
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LotjaGi2g1v0217500.2
n.a. Subtilisin-like protease 1; TAIR: AT5G19660.1 SITE-1 protease; Swiss-Prot: sp|Q0WUG6|SBT61_ARATH Subtilisin-like protease SBT6.1; TrEMBL-Plants: tr|V7C6B5|V7C6B5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0217500 LjG1.1_chr2 67206206 67215077 -
2 domain predictions
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LotjaGi4g1v0011100.1
n.a. Subtilisin-like protease; TAIR: AT1G62340.1 PA-domain containing subtilase family protein; Swiss-Prot: sp|F4HYR6|SBT24_ARATH Subtilisin-like protease SBT2.4; TrEMBL-Plants: tr|A0A151SU26|A0A151SU26_CAJCA Subtilisin-like protease; Found in the gene: LotjaGi4g1v0011100 LjG1.1_chr4 1383096 1388441 +
2 domain predictions
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LotjaGi4g1v0011100.2
n.a. Subtilisin-like protease; TAIR: AT1G62340.1 PA-domain containing subtilase family protein; Swiss-Prot: sp|F4HYR6|SBT24_ARATH Subtilisin-like protease SBT2.4; TrEMBL-Plants: tr|A0A151SU26|A0A151SU26_CAJCA Subtilisin-like protease; Found in the gene: LotjaGi4g1v0011100 LjG1.1_chr4 1383096 1388441 +
2 domain predictions
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LotjaGi5g1v0172800.1
n.a. Subtilisin-like protease; TAIR: AT1G62340.1 PA-domain containing subtilase family protein; Swiss-Prot: sp|F4HYR6|SBT24_ARATH Subtilisin-like protease SBT2.4; TrEMBL-Plants: tr|A0A151SU26|A0A151SU26_CAJCA Subtilisin-like protease; Found in the gene: LotjaGi5g1v0172800 LjG1.1_chr5 44206478 44211680 +
2 domain predictions
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LotjaGi5g1v0299800.1
n.a. Tripeptidyl-peptidase 2; TAIR: AT4G20850.1 tripeptidyl peptidase ii; Swiss-Prot: sp|F4JVN6|TPPII_ARATH Tripeptidyl-peptidase 2; TrEMBL-Plants: tr|I1LDQ6|I1LDQ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0299800 LjG1.1_chr5 61668997 61696849 +
2 domain predictions
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