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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR022991
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.420s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0049279.1
n.a. RecName: Full=60S ribosomal protein L30gi|2879811|emb|CAA11256.1| ribosomal protein L30 [Lupinus luteus] gi|6094048|sp|O49884.1|RL30_LUPLU chr0 16677869 16679908 +
3 domain predictions
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Lj0g3v0330009.1
n.a. PREDICTED: 60S ribosomal protein L30-like [Glycine max] gi|356536572|ref|XP_003536811.1| chr0 172501772 172504320 -
3 domain predictions
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Lj0g3v0333019.1
n.a. PREDICTED: 60S ribosomal protein L30-like [Cicer arietinum] gi|502180636|ref|XP_004516683.1| chr0 174275600 174277329 +
3 domain predictions
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Lj4g3v2704660.1
n.a. PREDICTED: 60S ribosomal protein L30-like [Glycine max] gi|356536572|ref|XP_003536811.1| chr4 36402350 36403639 +
3 domain predictions
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LotjaGi1g1v0525700.1
n.a. 60S ribosomal protein L30; TAIR: AT1G36240.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|O49884|RL30_LUPLU 60S ribosomal protein L30; TrEMBL-Plants: tr|I3S9Q1|I3S9Q1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0525700 LjG1.1_chr1 105258975 105263578 -
3 domain predictions
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LotjaGi2g1v0053800.1
n.a. 60S ribosomal protein L30; TAIR: AT1G36240.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|O49884|RL30_LUPLU 60S ribosomal protein L30; TrEMBL-Plants: tr|A0A0B2PLT2|A0A0B2PLT2_GLYSO 60S ribosomal protein L30; Found in the gene: LotjaGi2g1v0053800 LjG1.1_chr2 10665953 10670118 +
3 domain predictions
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LotjaGi4g1v0389100.1
n.a. 60S ribosomal protein L30; TAIR: AT1G36240.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|O49884|RL30_LUPLU 60S ribosomal protein L30; TrEMBL-Plants: tr|A0A0B2PLT2|A0A0B2PLT2_GLYSO 60S ribosomal protein L30; Found in the gene: LotjaGi4g1v0389100 LjG1.1_chr4 76743862 76745707 +
3 domain predictions
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