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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR023563
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.468s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0196299.1
n.a. PREDICTED: 60S ribosomal protein L13a-4-like [Glycine max] gi|356559017|ref|XP_003547798.1| chr0 95713893 95715785 -
2 domain predictions
3 GO terms
Lj0g3v0269849.1
n.a. PREDICTED: 60S ribosomal protein L13a-4-like [Glycine max] gi|356559017|ref|XP_003547798.1| chr0 139801282 139803209 +
2 domain predictions
3 GO terms
Lj0g3v0341589.1
n.a. PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Cicer arietinum] gi|502177164|ref|XP_004516022.1| chr0 179032777 179036147 -
2 domain predictions
3 GO terms
Lj1g3v0524400.1
n.a. PREDICTED: 50S ribosomal protein L13-like [Cicer arietinum] gi|502134531|ref|XP_004502153.1| chr1 6585320 6589883 +
2 domain predictions
3 GO terms
Lj2g3v1389190.1
n.a. PREDICTED: 60S ribosomal protein L13a-4-like [Cicer arietinum] gi|502126223|ref|XP_004499225.1| chr2 21896349 21897555 -
2 domain predictions
3 GO terms
LotjaGi1g1v0586600.1
n.a. 50S ribosomal protein L13; TAIR: AT3G07110.1 Ribosomal protein L13 family protein; Swiss-Prot: sp|Q9SFU1|R13A1_ARATH 60S ribosomal protein L13a-1; TrEMBL-Plants: tr|I3SXE7|I3SXE7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0586600 LjG1.1_chr1 112644164 112647191 +
2 domain predictions
3 GO terms
LotjaGi3g1v0040000.1
n.a. 50S ribosomal protein L13; TAIR: AT1G78630.1 Ribosomal protein L13 family protein; Swiss-Prot: sp|Q9SYL9|RK13_ARATH 50S ribosomal protein L13, chloroplastic; TrEMBL-Plants: tr|I3S696|I3S696_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0040000 LjG1.1_chr3 4321094 4325069 +
2 domain predictions
3 GO terms
LotjaGi3g1v0081900.1
n.a. 50S ribosomal protein L13; TAIR: AT5G48760.1 Ribosomal protein L13 family protein; Swiss-Prot: sp|Q9FKC0|R13A4_ARATH 60S ribosomal protein L13a-4; TrEMBL-Plants: tr|I3SXE7|I3SXE7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0081900 LjG1.1_chr3 9154823 9157674 -
2 domain predictions
3 GO terms
LotjaGi3g1v0082100.1
n.a. 50S ribosomal protein L13; TAIR: AT5G48760.1 Ribosomal protein L13 family protein; Swiss-Prot: sp|Q9FKC0|R13A4_ARATH 60S ribosomal protein L13a-4; TrEMBL-Plants: tr|I3SXE7|I3SXE7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0082100 LjG1.1_chr3 9178051 9180858 +
2 domain predictions
3 GO terms