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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR024075
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.587s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0038509.1
n.a. PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Cicer arietinum] gi|502154632|ref|XP_004509767.1| chr0 12502182 12522719 +
2 domain predictions
1 GO term
Lj0g3v0122989.1
n.a. PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like [Glycine max] gi|356514404|ref|XP_003525896.1| chr0 55063165 55077351 +
2 domain predictions
1 GO term
Lj1g3v3089430.1
n.a. PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like isoform X2 [Cicer arietinum] gi|502102072|ref|XP_004491958.1| chr1 35072292 35081039 +
2 domain predictions
1 GO term
Lj2g3v1203430.1
n.a. PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Cicer arietinum] gi|502154632|ref|XP_004509767.1| chr2 19336237 19347538 -
2 domain predictions
1 GO term
Lj2g3v1203430.2
n.a. PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Cicer arietinum] gi|502154632|ref|XP_004509767.1| chr2 19340340 19347538 -
2 domain predictions
1 GO term
LotjaGi2g1v0289500.1
n.a. DNA-directed RNA polymerase; TAIR: AT1G68990.1 male gametophyte defective 3; Swiss-Prot: sp|Q93Y94|RPOT1_NICSY DNA-directed RNA polymerase 1, mitochondrial; TrEMBL-Plants: tr|A0A0L9TN70|A0A0L9TN70_PHAAN DNA-directed RNA polymerase; Found in the gene: LotjaGi2g1v0289500 LjG1.1_chr2 76263469 76275343 -
2 domain predictions
1 GO term
LotjaGi4g1v0168100.1
n.a. DNA-directed RNA polymerase; TAIR: AT1G68990.1 male gametophyte defective 3; Swiss-Prot: sp|Q8L6J5|RPO1B_TOBAC DNA-directed RNA polymerase 1B, mitochondrial; TrEMBL-Plants: tr|A0A0S3R3N7|A0A0S3R3N7_PHAAN DNA-directed RNA polymerase; Found in the gene: LotjaGi4g1v0168100 LjG1.1_chr4 32222221 32246205 -
2 domain predictions
1 GO term
LotjaGi6g1v0200900.1
n.a. DNA-directed RNA polymerase; TAIR: AT2G24120.1 DNA/RNA polymerases superfamily protein; Swiss-Prot: sp|P69243|RPO3A_TOBAC DNA-directed RNA polymerase 3A, chloroplastic; TrEMBL-Plants: tr|K7KWI1|K7KWI1_SOYBN DNA-directed RNA polymerase; Found in the gene: LotjaGi6g1v0200900 LjG1.1_chr6 49774581 49797934 -
2 domain predictions
1 GO term