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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR024704
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.572s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1695250.1
n.a. PREDICTED: structural maintenance of chromosomes protein 1-like isoform X1 [Cicer arietinum] gi|502114983|ref|XP_004495097.1| chr2 26169191 26176870 +
2 domain predictions
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LotjaGi3g1v0061500.1
n.a. Structural maintenance of chromosomes protein; TAIR: AT5G62410.1 structural maintenance of chromosomes 2; Swiss-Prot: sp|Q9C5Y4|SMC21_ARATH Structural maintenance of chromosomes protein 2-1; TrEMBL-Plants: tr|A0A072TZX1|A0A072TZX1_MEDTR Structural maintenance of chromosomes protein; Found in the gene: LotjaGi3g1v0061500 LjG1.1_chr3 6504434 6515288 +
2 domain predictions
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LotjaGi4g1v0139100.1
n.a. Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp|Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr|A0A151RK13|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100 LjG1.1_chr4 20723374 20737029 -
2 domain predictions
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LotjaGi4g1v0139100.4
n.a. Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp|Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr|A0A151RK13|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100 LjG1.1_chr4 20723671 20736819 -
2 domain predictions
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LotjaGi4g1v0139100.5
n.a. Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp|Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr|A0A151RK13|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100 LjG1.1_chr4 20723671 20736819 -
2 domain predictions
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LotjaGi4g1v0139100.6
n.a. Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp|Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr|K7LXH6|K7LXH6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0139100 LjG1.1_chr4 20723671 20736836 -
2 domain predictions
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LotjaGi5g1v0181700.3
n.a. Structural maintenance of chromosomes protein; TAIR: AT3G54670.1 Structural maintenance of chromosomes (SMC) family protein; Swiss-Prot: sp|Q6Q1P4|SMC1_ARATH Structural maintenance of chromosomes protein 1; TrEMBL-Plants: tr|A0A0B2P8J7|A0A0B2P8J7_GLYSO Structural maintenance of chromosomes protein; Found in the gene: LotjaGi5g1v0181700 LjG1.1_chr5 46287576 46299650 -
2 domain predictions
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