Domain Predictions — View

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PIRSF005719

Source: PIRSF

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v1695250.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: structural maintenance of chromosomes protein 1-like isoform X1 [Cicer arietinum] gi\|502114983\|ref\|XP_004495097.1\|	Domains Coil G3DSA:3.40.50.300 IPR003395 IPR010935 IPR024704 IPR027417 PF02463 PF06470 PIRSF005719 PTHR18937 PTHR18937:SF177 SM00968 SSF52540 SSF75553 cd03275	15
LotjaGi3g1v0061500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural maintenance of chromosomes protein; TAIR: AT5G62410.1 structural maintenance of chromosomes 2; Swiss-Prot: sp\|Q9C5Y4\|SMC21_ARATH Structural maintenance of chromosomes protein 2-1; TrEMBL-Plants: tr\|A0A072TZX1\|A0A072TZX1_MEDTR Structural maintenance of chromosomes protein; Found in the gene: LotjaGi3g1v0061500	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.20.1060.20 G3DSA:3.30.70.1620 G3DSA:3.40.50.300 IPR003395 IPR010935 IPR024704 IPR027120 IPR027417 IPR036277 NON_CYTOPLASMIC_DOMAIN PF02463 PF06470 PIRSF005719 PTHR43941 PTHR43941:SF2 SM00968 SSF52540 SSF75553 TRANSMEMBRANE cd03273	22
LotjaGi4g1v0139100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp\|Q9FJL0\|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr\|A0A151RK13\|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100	Domains Coil G3DSA:1.20.1060.20 G3DSA:3.30.70.1620 G3DSA:3.40.50.300 IPR003395 IPR010935 IPR024704 IPR027417 IPR036277 IPR041738 PF02463 PF06470 PIRSF005719 PTHR43939 PTHR43939:SF1 SM00968 SSF52540 SSF75553 cd03274 mobidb-lite	20
LotjaGi4g1v0139100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp\|Q9FJL0\|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr\|A0A151RK13\|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100	Domains Coil G3DSA:1.20.1060.20 G3DSA:3.30.70.1620 G3DSA:3.40.50.300 IPR003395 IPR010935 IPR024704 IPR027417 IPR036277 IPR041738 PF02463 PF06470 PIRSF005719 PTHR43939 PTHR43939:SF1 SM00968 SSF52540 SSF75553 cd03274 mobidb-lite	20
LotjaGi4g1v0139100.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp\|Q9FJL0\|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr\|A0A151RK13\|A0A151RK13_CAJCA Structural maintenance of chromosomes protein 4; Found in the gene: LotjaGi4g1v0139100	Domains Coil G3DSA:1.20.1060.20 G3DSA:3.30.70.1620 G3DSA:3.40.50.300 IPR003395 IPR010935 IPR024704 IPR027417 IPR036277 IPR041738 PF02463 PF06470 PIRSF005719 PTHR43939 PTHR43939:SF1 SM00968 SSF52540 SSF75553 cd03274 mobidb-lite	20
LotjaGi4g1v0139100.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural maintenance of chromosomes protein; TAIR: AT5G48600.2 structural maintenance of chromosome 3; Swiss-Prot: sp\|Q9FJL0\|SMC4_ARATH Structural maintenance of chromosomes protein 4; TrEMBL-Plants: tr\|K7LXH6\|K7LXH6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0139100	Domains Coil G3DSA:1.20.1060.20 G3DSA:3.30.70.1620 G3DSA:3.40.50.300 IPR003395 IPR010935 IPR024704 IPR027417 IPR036277 IPR041738 PF02463 PF06470 PIRSF005719 PTHR43939 PTHR43939:SF1 SM00968 SSF52540 SSF75553 cd03274 mobidb-lite	20
LotjaGi5g1v0181700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structural maintenance of chromosomes protein; TAIR: AT3G54670.1 Structural maintenance of chromosomes (SMC) family protein; Swiss-Prot: sp\|Q6Q1P4\|SMC1_ARATH Structural maintenance of chromosomes protein 1; TrEMBL-Plants: tr\|A0A0B2P8J7\|A0A0B2P8J7_GLYSO Structural maintenance of chromosomes protein; Found in the gene: LotjaGi5g1v0181700	Domains Coil G3DSA:1.20.1060.20 G3DSA:3.30.70.1620 G3DSA:3.40.50.300 IPR003395 IPR010935 IPR024704 IPR027417 IPR028468 IPR036277 PF02463 PF06470 PIRSF005719 PTHR18937 PTHR18937:SF12 SM00968 SSF52540 SSF57997 SSF75553 cd03275 mobidb-lite	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29