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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR025749
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.952s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0209219.1
n.a. PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 1-like [Cicer arietinum] gi|502164812|ref|XP_004513276.1| chr0 104832198 104836497 -
2 domain predictions
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Lj1g3v3438910.1
n.a. PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 2-like isoform X1 [Cicer arietinum] gi|502103891|ref|XP_004492387.1| chr1 39501851 39505637 -
2 domain predictions
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Lj5g3v1949650.1
n.a. Sphingomyelin synthetase family protein isoform 1 [Theobroma cacao] gi|508724855|gb|EOY16752.1| chr5 27436651 27440251 +
2 domain predictions
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LotjaGi1g1v0574200.1
n.a. Phosphatidylinositol:ceramide inositolphosphotransferase; TAIR: AT3G54020.1 Inositol phosphorylceramide synthase 1; Swiss-Prot: sp|Q9M325|IPCS1_ARATH Phosphatidylinositol:ceramide inositolphosphotransferase 1; TrEMBL-Plants: tr|I1JLW4|I1JLW4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0574200 LjG1.1_chr1 110855827 110859863 -
2 domain predictions
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LotjaGi3g1v0219000.1
n.a. Phosphatidylinositol:ceramide inositolphosphotransferase; TAIR: AT3G54020.1 Inositol phosphorylceramide synthase 1; Swiss-Prot: sp|Q9M325|IPCS1_ARATH Phosphatidylinositol:ceramide inositolphosphotransferase 1; TrEMBL-Plants: tr|I1JLW4|I1JLW4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0219000 LjG1.1_chr3 32975106 32980135 -
2 domain predictions
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LotjaGi5g1v0290200.1
n.a. Phosphatidylinositol:ceramide inositolphosphotransferase; TAIR: AT1G43580.1 Sphingomyelin synthetase family protein; Swiss-Prot: sp|B8ACH9|IPCS_ORYSI Phosphatidylinositol:ceramide inositolphosphotransferase; TrEMBL-Plants: tr|I1NH32|I1NH32_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0290200 LjG1.1_chr5 60680155 60683318 +
2 domain predictions
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