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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0219000 |
| Transcript ID | LotjaGi3g1v0219000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatidylinositol:ceramide inositolphosphotransferase; TAIR: AT3G54020.1 Inositol phosphorylceramide synthase 1; Swiss-Prot: sp|Q9M325|IPCS1_ARATH Phosphatidylinositol:ceramide inositolphosphotransferase 1; TrEMBL-Plants: tr|I1JLW4|I1JLW4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0219000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:32975106..32980135) extracted from Lotus japonicus Gifu genome v1.2.
CTCTTCTCAACTGTCTCTCCGCGTTCATCTCGCGTGCATAGCAGCAGTCAGAAAAACACAGCAACGCAGAGAGAAGAGAT TCAGAGAGAGAGAGAGAGAGGAAAACCCCTTTTGACCATTGCGCTTCCGTTTCCATTTCTTCCATTGATTCCATCATCCA AAGCCTTTCTTCTGTGATCGTTCATCTCATATCTGGGTTTATCTCTGTGAATTGTGATCACTCACAAGTCTCAGATCTTT TCCCGTTCCCAATTTGGATTTGGATACCCAGTTGCGTTTCTCTTTCTGGGTATACTGTTTTTCATCAAAAGTTTCGGTTT TGCGAAGTGGGTGAAGTTTGAAATAAGGGATTGATTCAATCTGGGTTTTGCACAGATTGGTCAATCTTGTTAACTTTAAC AGTGTGGTTATGAAGTAATATGGAAGTGCTTGTTGCTTGCATAATCCAACAACAACAACAACTACTACTACTACAAGAAC AACAACAACAACAATAACATGTCTCTTTACATCGGTCGTGAGGCTTCAAAGGTTTTTGTTTTGCTTTTTGTCTCTTTATT CATTTGTGTATTGCTCTTTTTTTGTGTATGTTTGGTGTTTGATGTTTGAATATCTGTTTGTGTAGCTATGGAAGAGAATT TGCTCAGAGACAACTACTGAGCTCAACCTCCTTGCTGAGAATTGGAAGTACCTTCTCGCTGGTCTTATTGGTCAGGTTTG TTCTATTTTTATCAACCTCGAACGTTATTCTTCAAGTTGTGGTTTCCCTTTTGTGTAAAGGATGCTAAGGTTCTTTTTCT TTTCCTTTGGTGACTAGTAGAAAATTTCTGAAAGCGTTTTTTGGCTGTGAACTTTACTTGCATGCTACAAAAAGTTCAAC TTTTCTTCTTCATGTTATTGTTGTTGGGGAGGTTATTTGAAATTTTGCATATATATTTTTGGTGTTTTATGGGTAGGTAA GAACTAAGAACTAAGAACAAGGTTTATAGTTCTATTATTTGATTTAATCACTGAACTTTATTTTGTCAGTGCTTATATCA AGTATCAGGGTTGATGGCTTGGTGTGTTGATGAGGGAATTAAATGATTTTTTTGTCATACTCTTCAGCTATGATGATTTG GCATTTGGTGATGCATGCTTTAGAATTGGGATTTCCAATTATTTGTTCATCTGAAATACAAGTTTGTTCTCAATTCTATA TGGAATTCTGGGCTCTCTGCAGGTTATCTAATGTTTCATTTTCCTCATTAGGAAAGGCTTACAGTTTGCAGCAAGTTGTT GAGTGAAAATATTGAGGACAAATGTTTACTGAATAAAGAGAAAGAAGTTAGAATGGCCAATTTTTTTAAAATTGTATCTG TTTGTGTGTTTTCTATCCTTGTCTTTGTTGTGCATAAAGTGTAACTGGGTAAACCATTGGTGTACTTTGTTTATTGACAT ATTTTTATTTTGTTTTTCTATTTGATGTCTAAATTTAAAACTGTTTCCCTACAGTATATACACGGTTTGGCTGCCCGAGG GGTTCATTATTTTCATAGGCCGGGTCCTATTCTGCAAGATGTTGGATTCTTCCTTCTTCCGGTTCGTGATTGTCATTCCA TAATTTTTTTTCGATCACCCTCAAAAAATCTATGCATAAAAATGATAAAAAGGTCTTTAACTCTTTATAATACTAATATT ATTCTCGATGCTGCTACAGGAGCTTGGGCAAGACAAAGCTTACATCAGTGAAACACTGTTCACCTCTATCTTTGTGTCCT TTGCCTTGGTAAGAAACTCCTCCCCCTCTTTCTCCGTTTTCATATATTTTGCATAGCTATGGCATCACAAAACATTAAGA CAGATGCTATATTCTACTGCGAATTACCATTTTAGTTACTGGCGTGACAAATCTCCTAGGTAAATATGGCTTGATCATCA ATGTGTGCCCCAAGTTATCTGATACTCGGGTGTGTCCTTCAAGTCAAAGCTATAAACAGTCATAGCCATATATATTTTGT CGTCATGGCTTTGTGAATTTTAGAAGTTACAAATGAAGTTTTTCAAGGTGTATGTAGGTACTGACTGACTGTTGAGAACT ACTAGTAAAAGAAAAAAAAATAAAAGAATGATAAATGAAATAAAAGCAAATATGATTCTGGTTTGAAGTTTTCTTATAGT AGTTGAGTACTGATGTTGGAGAATGATTATTTGCTCTCACTTCTATGGATTTATTCCTTTTTTATCTTTGCTTGATACTC TTCTAGTGCAAGAGTTCATGTAATCAAACTCAGTAAGTGTACCGTCCTTTCTATTTAAGTTGCTTATTTTCCCTTTTTCC TGTACCAATTTGATCGGTATCATTTTTTTTGGTGACATTCTCATTTCAGCAAGTATTCTTTTTTTTTTTAATTCCTGTTG AAGTTTTATGATATATTCTTTGATATGTGCTTTTGCAGTGGACGTTTCATCCTTTCATATTGAAGAGCAGAAAGATCTAT ACAGTTCTAATATGGTGCAGGGTTCTCGCCTTCTTAGTTGTAAGTGTTGATTAAGCCATGTCATGTTCATTAAAGTATTG TTTAATCTTTTGCGAACCATTGTTGAATAGATGGGTGCTTAGGGTAATGAATTCATGGATCAAGGTGAGTTGCCAGCATA AAATGCAGCCTGTAATGCGCACACGACTAATGTTGAATTGTTGATTACTTTGTAATGTCATTTTGCCCTGCTTCCTTTTT CATCTTGTATGACCAGCGCAGTATATTTCTGGCCATTTAATGTTTTAGATCAAGTACCTTTTTGGCATTTATAAATATGC AAATTTTCTTATTATGTCTAGCTATTGTGTATTTGTTTACTGCAGGCTTCTCAGTTTCTTCGTATAATGACATTTTATTC TACACAGCTTCCTGGTCCAAACTACCATTGCCGTGAGGTATAAATGTCTAAGAGTATGCTCTACTTTTCTTTATCAGTTT AAATTGCATGTGTGTAATATCTTTTAAATTTTTCCCATTTTGTTTATAATTTTACACTCTTAATTATCATGCAGGGTTCC AAACTTGCCACATTGCCTCGTCCAGATACTGTCCTTGAAGTTTTCGTGATTAATTGTTAGTACATGTTATTGTATTGCAG TTTTAGCTATGATGCTGTGATGATTGTTTTGGAATTTATTCAATTTTAATATTTTAATATGCAGTTCGGCGTGGTATCTT GTATGGATGCGGTGACTTGATATTTTCATCACATATGATCTTCACTCTTACTTTTGTGCGTACATATCAGAAATATGGCA CTCGAAGGTAAAATTTACTTATGGAACTCTTTTTGGAAGAATTTAGTTAGTCACTGACTATTGATATGGCCAAATAAGTC CTTATAAAGAGAACTGTTGAGCAACCTTCACCTCTGAGCTAACTTTTAGGGTAGAGGTAGACCTAACCTAAAAGTCACAC ACCCACGGTAACTTTTGTTTGGTCATGTCATTTTTTATGTTTGAATTTAAGTTTTGATTTATTTTGATTGTTGTTGAGCC ACCAGATCCCTCAAGCAGCTAGGGTGGTTGCTTGCTATTATTCAGAGCCTTTTGATAATAGCATCTCGCAAACATTACAC GGTTGACGTAGTTGTTGCCTGGTAAGGAGCATTCTTTGCCTTGTGATGGGGAAAACTGTGGTCTATGTTACTTGAGTTAA TCTTTTGGTCCCTGGTTGGCAGGTACACTGTTAATTTGGTGGTGTTTTTTGTTGACAAGAAATTACCAGGTTAGCAAACT TGTGCAAACTTGCAATGTGCTATCGTCATTTACTTTAGCCGCTATTTGCTGTTGTTCTGACTGTTGTTCTCTGCAGAATT GCCGGACCGGTCAAATGCGGCTACAACCCTGCTACCATTGAGCACGAAAGACAAAGATGGAAAGATCAAAGAGGAGAACC ACAAGCTATTGAATGGGAATTCTGGAGACCCTGTGGATTGGGTATGGTGAATATGCTTGCCCTTTTTCCCTTGTTCCTTT TATGCAATGTCTTTGTCTGTGACATAACATGGTTATTTTGGCTTTCTCAGAGGCAGAGAACTCAAGTAAATGGCAAGATC ATGGATGACGGCAATACCGACTCTGTCACTAACGGTGTGTAGATATAGGAGCCTCCGCCGAACAATTTGGATCTACTGCA ATATTGCTATTGGAAAGCTGCAACCTTCAATTGGAAGATCTTGTTGCGTGAACATACGTTCTTAATTCAAATTAGTACCT CTGATTTGTATGTGAAATTGAAACTGGGTGATGCTTCTCAACATTTTGCAGCCCTGATCCGTTGTCATGTTAAATTATCT GGCACAAAGCATATGCCATAGAAAGTATCCAATCTCTCTCATCTGCATCATTGAAACCATGTGCACCTTTCTGCCTAGTC TATTTTTGCTGGTTTTTTTATTCTCCTTACATATTCACATGCTAATGATCAGCAACATGCAATACTAACTTTTAATGTAA AGCAGAGTAATTTTGATTCCTAGAGCAACTTATGCCTAGTTAAAGCTGAATGCATCCATTAACACTTTGCTGAAAAGGGG TTGGTAGTGGAAATGGGTTAGAGGACTATGAGCCCATTTGAATATAAAAAAAAACACTTACTGAAGTTTCTCTACCAAAA AATACACTAGATAAGCTTTAATAAGCGTTTTTTGTTTCGCAACAAATGGACTCCATAGCGATTACTTGGCATTGTAGGTT CTTGGTCTCTCAAATGATGAGTTTGGTGGTATTTCAAATGCACAGAACCTTTAAATTTAAAAATGGTGACATGAGGGAGC ACAATCAGCACATGATGTTTTGACTTTGCATGTGCTTTTCTATGCATAACAATGCTACATGTCGATTGTCCCATTCCTTG TCCCTCACATGCATCACCTCCTTTTTCACATGGACCACCCCTCTATTCCTCTTCACGCGGTTTCTGGCCTTTTTACATTA TTCAAGCTATGCCTATATGGTGAAATTCTGGAAAATCACTTTTGCTTTTAAGGAAAAATGTTTTGGATTA
CDS sequence (LotjaGi3g1v0219000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCTTTACATCGGTCGTGAGGCTTCAAAGCTATGGAAGAGAATTTGCTCAGAGACAACTACTGAGCTCAACCTCCT TGCTGAGAATTGGAAGTACCTTCTCGCTGGTCTTATTGGTCAGTATATACACGGTTTGGCTGCCCGAGGGGTTCATTATT TTCATAGGCCGGGTCCTATTCTGCAAGATGTTGGATTCTTCCTTCTTCCGGAGCTTGGGCAAGACAAAGCTTACATCAGT GAAACACTGTTCACCTCTATCTTTGTGTCCTTTGCCTTGTGGACGTTTCATCCTTTCATATTGAAGAGCAGAAAGATCTA TACAGTTCTAATATGGTGCAGGGTTCTCGCCTTCTTAGTTGCTTCTCAGTTTCTTCGTATAATGACATTTTATTCTACAC AGCTTCCTGGTCCAAACTACCATTGCCGTGAGGGTTCCAAACTTGCCACATTGCCTCGTCCAGATACTGTCCTTGAAGTT TTCGTGATTAATTTTCGGCGTGGTATCTTGTATGGATGCGGTGACTTGATATTTTCATCACATATGATCTTCACTCTTAC TTTTGTGCGTACATATCAGAAATATGGCACTCGAAGATCCCTCAAGCAGCTAGGGTGGTTGCTTGCTATTATTCAGAGCC TTTTGATAATAGCATCTCGCAAACATTACACGGTTGACGTAGTTGTTGCCTGGTACACTGTTAATTTGGTGGTGTTTTTT GTTGACAAGAAATTACCAGAATTGCCGGACCGGTCAAATGCGGCTACAACCCTGCTACCATTGAGCACGAAAGACAAAGA TGGAAAGATCAAAGAGGAGAACCACAAGCTATTGAATGGGAATTCTGGAGACCCTGTGGATTGGAGGCAGAGAACTCAAG TAAATGGCAAGATCATGGATGACGGCAATACCGACTCTGTCACTAACGGTGTGTAG
Protein sequence (LotjaGi3g1v0219000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLYIGREASKLWKRICSETTTELNLLAENWKYLLAGLIGQYIHGLAARGVHYFHRPGPILQDVGFFLLPELGQDKAYIS ETLFTSIFVSFALWTFHPFILKSRKIYTVLIWCRVLAFLVASQFLRIMTFYSTQLPGPNYHCREGSKLATLPRPDTVLEV FVINFRRGILYGCGDLIFSSHMIFTLTFVRTYQKYGTRRSLKQLGWLLAIIQSLLIIASRKHYTVDVVVAWYTVNLVVFF VDKKLPELPDRSNAATTLLPLSTKDKDGKIKEENHKLLNGNSGDPVDWRQRTQVNGKIMDDGNTDSVTNGV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 306 | 306 | 6.8E-179 | – | |
| PANTHER | 1 | 306 | 306 | 6.8E-179 | – | |
| Phobius | 1 | 76 | 76 | - | – | |
| Phobius | 77 | 94 | 18 | - | – | |
| TMHMM | 79 | 101 | 23 | - | – | |
| Phobius | 95 | 105 | 11 | - | – | |
| Phobius | 106 | 125 | 20 | - | – | |
| TMHMM | 108 | 130 | 23 | - | – | |
| Phobius | 126 | 167 | 42 | - | – | |
| TMHMM | 167 | 189 | 23 | - | – | |
| Phobius | 168 | 189 | 22 | - | – | |
| Pfam | 172 | 240 | 69 | 5.0E-23 | ||
| Phobius | 190 | 200 | 11 | - | – | |
| Phobius | 201 | 217 | 17 | - | – | |
| Phobius | 218 | 222 | 5 | - | – | |
| Phobius | 223 | 241 | 19 | - | – | |
| Phobius | 242 | 311 | 70 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0219000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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