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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR028055
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.509s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0223399.1
n.a. PREDICTED: mitochondrial inner membrane protein OXA1-like [Glycine max] gi|356548765|ref|XP_003542770.1| chr0 115163139 115174137 -
2 domain predictions
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Lj3g3v3188540.1
n.a. PREDICTED: inner membrane protein PPF-1, chloroplastic-like [Glycine max] gi|356539022|ref|XP_003537999.1| chr3 39321755 39327590 -
2 domain predictions
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LotjaGi2g1v0178100.1
n.a. Membrane protein insertase YidC; TAIR: AT5G62050.1 inner membrane OXA1-like protein; Swiss-Prot: sp|Q42191|OXA1_ARATH Mitochondrial inner membrane protein OXA1; TrEMBL-Plants: tr|K7M0E7|K7M0E7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0178100 LjG1.1_chr2 59856686 59866878 -
2 domain predictions
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LotjaGi2g1v0371800.1
n.a. Membrane protein insertase YidC; TAIR: AT2G28800.1 63 kDa inner membrane family protein; Swiss-Prot: sp|Q9FY06|PPF1_PEA Inner membrane protein PPF-1, chloroplastic; TrEMBL-Plants: tr|A0A0B2QQI6|A0A0B2QQI6_GLYSO Inner membrane protein PPF-1, chloroplastic; Found in the gene: LotjaGi2g1v0371800 LjG1.1_chr2 86859810 86867033 -
2 domain predictions
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LotjaGi6g1v0097300.1
n.a. Membrane protein insertase YidC; TAIR: AT1G24490.1 OxaA/YidC-like membrane insertion protein; Swiss-Prot: sp|Q9FYL3|ALB31_ARATH ALBINO3-like protein 1, chloroplastic; TrEMBL-Plants: tr|I1MYL3|I1MYL3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0097300 LjG1.1_chr6 21111124 21122309 -
2 domain predictions
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