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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR028258
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.487s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0242609.1
n.a. PREDICTED: exocyst complex component SEC3A-like [Cicer arietinum] gi|502125905|ref|XP_004499110.1| chr0 125795141 125796494 +
3 domain predictions
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Lj5g3v0080900.1
n.a. PREDICTED: exocyst complex component SEC3A-like [Cicer arietinum] gi|502125905|ref|XP_004499110.1| chr5 396517 409472 -
3 domain predictions
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LotjaGi1g1v0416200.1
n.a. Exocyst complex component SEC3A; TAIR: AT1G47550.1 exocyst complex component sec3A; Swiss-Prot: sp|Q9SX85|SEC3A_ARATH Exocyst complex component SEC3A; TrEMBL-Plants: tr|I1JTE4|I1JTE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0416200 LjG1.1_chr1 90899522 90923012 -
3 domain predictions
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LotjaGi5g1v0021200.1
n.a. Exocyst complex component SEC3A; TAIR: AT1G47550.1 exocyst complex component sec3A; Swiss-Prot: sp|Q9SX85|SEC3A_ARATH Exocyst complex component SEC3A; TrEMBL-Plants: tr|A0A151RWR5|A0A151RWR5_CAJCA Exocyst complex component SEC3A; Found in the gene: LotjaGi5g1v0021200 LjG1.1_chr5 3867967 3881818 +
3 domain predictions
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LotjaGi5g1v0021200.2
n.a. Exocyst complex component SEC3A; TAIR: AT1G47550.1 exocyst complex component sec3A; Swiss-Prot: sp|Q9SX85|SEC3A_ARATH Exocyst complex component SEC3A; TrEMBL-Plants: tr|A0A151RWR5|A0A151RWR5_CAJCA Exocyst complex component SEC3A; Found in the gene: LotjaGi5g1v0021200 LjG1.1_chr5 3868057 3881118 +
3 domain predictions
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LotjaGi5g1v0021200.3
n.a. Exocyst complex component SEC3A; TAIR: AT1G47550.1 exocyst complex component sec3A; Swiss-Prot: sp|Q9SX85|SEC3A_ARATH Exocyst complex component SEC3A; TrEMBL-Plants: tr|A0A151RWR5|A0A151RWR5_CAJCA Exocyst complex component SEC3A; Found in the gene: LotjaGi5g1v0021200 LjG1.1_chr5 3868123 3880406 +
3 domain predictions
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LotjaGi5g1v0021200.4
n.a. Exocyst complex component SEC3A; TAIR: AT1G47550.1 exocyst complex component sec3A; Swiss-Prot: sp|Q9SX85|SEC3A_ARATH Exocyst complex component SEC3A; TrEMBL-Plants: tr|A0A151RWR5|A0A151RWR5_CAJCA Exocyst complex component SEC3A; Found in the gene: LotjaGi5g1v0021200 LjG1.1_chr5 3868123 3880883 +
3 domain predictions
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