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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR029018
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.435s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0256609.1
n.a. PREDICTED: beta-hexosaminidase 2-like [Cicer arietinum] gi|502087608|ref|XP_004488586.1| chr0 133211203 133214998 +
3 domain predictions
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Lj0g3v0287929.1
n.a. PREDICTED: beta-hexosaminidase 1-like [Cicer arietinum] gi|502102461|ref|XP_004492083.1| chr0 149630602 149634233 -
3 domain predictions
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LotjaGi3g1v0120000.1
n.a. Alpha-N-acetylglucosaminidase; TAIR: AT5G13690.1 alpha-N-acetylglucosaminidase family / NAGLU family; Swiss-Prot: sp|Q9FNA3|NAGLU_ARATH Alpha-N-acetylglucosaminidase; TrEMBL-Plants: tr|A0A151SYJ6|A0A151SYJ6_CAJCA Alpha-N-acetylglucosaminidase; Found in the gene: LotjaGi3g1v0120000 LjG1.1_chr3 14670475 14685805 -
2 domain predictions
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LotjaGi3g1v0129400.1
n.a. Beta-hexosaminidase; TAIR: AT1G05590.1 beta-hexosaminidase 2; Swiss-Prot: sp|Q9SYK0|HEXO2_ARATH Beta-hexosaminidase 2; TrEMBL-Plants: tr|A0A0L9UIQ8|A0A0L9UIQ8_PHAAN Beta-hexosaminidase; Found in the gene: LotjaGi3g1v0129400 LjG1.1_chr3 15890494 15894780 +
3 domain predictions
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LotjaGi4g1v0176200_LC.1
n.a. Beta-hexosaminidase; TAIR: AT3G55260.1 beta-hexosaminidase 1; Swiss-Prot: sp|A7WM73|HEXO1_ARATH Beta-hexosaminidase 1; TrEMBL-Plants: tr|D7TM08|D7TM08_VITVI Beta-hexosaminidase; Found in the gene: LotjaGi4g1v0176200_LC LjG1.1_chr4 35690894 35695188 -
3 domain predictions
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