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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR031309
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 20 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.752s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0272429.1
n.a. PREDICTED: 60S ribosomal protein L11-like [Glycine max] gi|356543128|ref|XP_003540015.1| chr0 141165191 141167336 +
2 domain predictions
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Lj2g3v1599690.1
n.a. 50S ribosomal protein L5 [Medicago truncatula] gi|357507543|ref|XP_003624060.1| chr2 25301303 25304417 +
2 domain predictions
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LotjaGi1g1v0058600.2
n.a. 50S ribosomal protein L5; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|I3T8M4|I3T8M4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0058600 LjG1.1_chr1 8203653 8208884 -
2 domain predictions
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LotjaGi1g1v0058600.3
n.a. 60S ribosomal protein L11; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|I3T8M4|I3T8M4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0058600 LjG1.1_chr1 8206869 8208023 -
2 domain predictions
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LotjaGi1g1v0058600.4
n.a. 50S ribosomal protein L5; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|I3T8M4|I3T8M4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0058600 LjG1.1_chr1 8206869 8208615 -
2 domain predictions
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LotjaGi1g1v0058600.5
n.a. 50S ribosomal protein L5; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|I3T8M4|I3T8M4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0058600 LjG1.1_chr1 8206869 8208740 -
2 domain predictions
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LotjaGi1g1v0058600.6
n.a. 50S ribosomal protein L5; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|I3T8M4|I3T8M4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0058600 LjG1.1_chr1 8206869 8208876 -
2 domain predictions
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LotjaGi1g1v0058700.1
n.a. 50S ribosomal protein L5; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|I3T8M4|I3T8M4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0058700 LjG1.1_chr1 8216948 8222125 -
2 domain predictions
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LotjaGi1g1v0058700.4
n.a. 60S ribosomal protein L11; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|I3T8M4|I3T8M4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0058700 LjG1.1_chr1 8220108 8220978 -
2 domain predictions
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LotjaGi1g1v0058700.5
n.a. 50S ribosomal protein L5; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|I3T8M4|I3T8M4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0058700 LjG1.1_chr1 8220108 8221858 -
2 domain predictions
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LotjaGi1g1v0373400.1
n.a. 60S ribosomal protein L11; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|A0A0B2QKZ6|A0A0B2QKZ6_GLYSO Endoglucanase; Found in the gene: LotjaGi1g1v0373400 LjG1.1_chr1 85182286 85182825 +
2 domain predictions
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LotjaGi1g1v0373400.2
n.a. 60S ribosomal protein L11; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|A0A0B2QKZ6|A0A0B2QKZ6_GLYSO Endoglucanase; Found in the gene: LotjaGi1g1v0373400 LjG1.1_chr1 85182376 85182989 +
2 domain predictions
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LotjaGi3g1v0254400.1
n.a. 50S ribosomal protein L5; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|I3S428|I3S428_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0254400 LjG1.1_chr3 43163222 43165904 -
2 domain predictions
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LotjaGi3g1v0254400.2
n.a. 60S ribosomal protein L11; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|A0A0B2QKZ6|A0A0B2QKZ6_GLYSO Endoglucanase; Found in the gene: LotjaGi3g1v0254400 LjG1.1_chr3 43163868 43165073 -
2 domain predictions
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LotjaGi3g1v0254400.3
n.a. 60S ribosomal protein L11; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|A0A0B2QKZ6|A0A0B2QKZ6_GLYSO Endoglucanase; Found in the gene: LotjaGi3g1v0254400 LjG1.1_chr3 43163868 43165767 -
2 domain predictions
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LotjaGi3g1v0254400.4
n.a. 50S ribosomal protein L5; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|I3S428|I3S428_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0254400 LjG1.1_chr3 43163868 43165922 -
2 domain predictions
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LotjaGi4g1v0134900.1
n.a. 50S ribosomal protein L5, putative; TAIR: AT4G01310.1 Ribosomal L5P family protein; Swiss-Prot: sp|O04603|RK5_ARATH 50S ribosomal protein L5, chloroplastic; TrEMBL-Plants: tr|I3SLN7|I3SLN7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0134900 LjG1.1_chr4 19674446 19677818 -
2 domain predictions
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LotjaGi5g1v0119500.1
n.a. 50S ribosomal protein L5; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|I3S428|I3S428_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0119500 LjG1.1_chr5 24969220 24972055 +
2 domain predictions
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LotjaGi5g1v0119500.2
n.a. 50S ribosomal protein L5; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|I3S428|I3S428_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0119500 LjG1.1_chr5 24969422 24971884 +
2 domain predictions
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LotjaGi5g1v0119500.3
n.a. 60S ribosomal protein L11; TAIR: AT2G42740.1 ribosomal protein large subunit 16A; Swiss-Prot: sp|P46287|RL11_MEDSA 60S ribosomal protein L11; TrEMBL-Plants: tr|A0A0B2QKZ6|A0A0B2QKZ6_GLYSO Endoglucanase; Found in the gene: LotjaGi5g1v0119500 LjG1.1_chr5 24970713 24971884 +
2 domain predictions
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