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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR032054
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.933s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0132019.1
n.a. PREDICTED: CDT1-like protein b-like isoform X1 [Cicer arietinum] gi|502163312|ref|XP_004512799.1| chr0 60190895 60195764 +
2 domain predictions
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Lj5g3v1062470.1
n.a. PREDICTED: CDT1-like protein a, chloroplastic-like [Cicer arietinum] gi|502115034|ref|XP_004495110.1| chr5 17256932 17260439 -
2 domain predictions
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LotjaGi2g1v0174200.1
n.a. CDT1-like protein a, chloroplastic; TAIR: AT3G54710.1 CDT1-like protein B; Swiss-Prot: sp|Q9M1S9|CDT1B_ARATH CDT1-like protein b; TrEMBL-Plants: tr|A0A0B2QXX1|A0A0B2QXX1_GLYSO CDT1-like protein a, chloroplastic; Found in the gene: LotjaGi2g1v0174200 LjG1.1_chr2 59197189 59204089 +
2 domain predictions
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LotjaGi2g1v0174200.2
n.a. CDT1-like protein a, chloroplastic; TAIR: AT3G54710.1 CDT1-like protein B; Swiss-Prot: sp|Q9M1S9|CDT1B_ARATH CDT1-like protein b; TrEMBL-Plants: tr|A0A0B2QXX1|A0A0B2QXX1_GLYSO CDT1-like protein a, chloroplastic; Found in the gene: LotjaGi2g1v0174200 LjG1.1_chr2 59198945 59204091 +
2 domain predictions
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LotjaGi5g1v0179700.1
n.a. CDT1-like protein a, chloroplastic; TAIR: AT2G31270.1 CDT1-like protein A; Swiss-Prot: sp|Q9SJW9|CDT1A_ARATH CDT1-like protein a, chloroplastic; TrEMBL-Plants: tr|A0A072VLQ6|A0A072VLQ6_MEDTR DNA replication factor CDT1-like protein; Found in the gene: LotjaGi5g1v0179700 LjG1.1_chr5 45740307 45744225 -
2 domain predictions
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