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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR034285
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We have found 31 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.728s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0073600.1
n.a. Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9SIY8|LAC5_ARATH Laccase-5; TrEMBL-Plants: tr|A0A0S3RKD8|A0A0S3RKD8_PHAAN Laccase; Found in the gene: LotjaGi1g1v0073600 LjG1.1_chr1 10583627 10586838 +
2 domain predictions
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LotjaGi1g1v0081300.1
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A151S1M1|A0A151S1M1_CAJCA Laccase; Found in the gene: LotjaGi1g1v0081300 LjG1.1_chr1 11775299 11779100 -
2 domain predictions
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LotjaGi1g1v0081300.2
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A151S1M1|A0A151S1M1_CAJCA Laccase; Found in the gene: LotjaGi1g1v0081300 LjG1.1_chr1 11775683 11778473 -
2 domain predictions
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LotjaGi1g1v0114400.1
n.a. Laccase; TAIR: AT2G30210.1 laccase 3; Swiss-Prot: sp|Q56YT0|LAC3_ARATH Laccase-3; TrEMBL-Plants: tr|I1JHH8|I1JHH8_SOYBN Laccase; Found in the gene: LotjaGi1g1v0114400 LjG1.1_chr1 17994349 17998701 +
2 domain predictions
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LotjaGi1g1v0114400.2
n.a. Laccase; TAIR: AT2G30210.1 laccase 3; Swiss-Prot: sp|Q56YT0|LAC3_ARATH Laccase-3; TrEMBL-Plants: tr|G7JZP3|G7JZP3_MEDTR Laccase; Found in the gene: LotjaGi1g1v0114400 LjG1.1_chr1 17994717 17998285 +
2 domain predictions
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LotjaGi1g1v0123400.1
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1JHB0|I1JHB0_SOYBN Laccase; Found in the gene: LotjaGi1g1v0123400 LjG1.1_chr1 19590354 19595836 -
2 domain predictions
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LotjaGi1g1v0123400.2
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|G7KE42|G7KE42_MEDTR Laccase; Found in the gene: LotjaGi1g1v0123400 LjG1.1_chr1 19590799 19593819 -
2 domain predictions
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LotjaGi1g1v0218900.1
n.a. Laccase; TAIR: AT5G01040.1 laccase 8; Swiss-Prot: sp|Q9LFD2|LAC8_ARATH Laccase-8; TrEMBL-Plants: tr|A0A072U0V9|A0A072U0V9_MEDTR Laccase; Found in the gene: LotjaGi1g1v0218900 LjG1.1_chr1 48487254 48495551 -
2 domain predictions
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LotjaGi1g1v0579400.1
n.a. Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A072U047|A0A072U047_MEDTR Laccase; Found in the gene: LotjaGi1g1v0579400 LjG1.1_chr1 111893240 111896984 -
2 domain predictions
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LotjaGi1g1v0582000.1
n.a. Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A151QZC4|A0A151QZC4_CAJCA Laccase-17; Found in the gene: LotjaGi1g1v0582000 LjG1.1_chr1 112135679 112140955 +
2 domain predictions
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LotjaGi1g1v0582000.2
n.a. Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|I1KZE6|I1KZE6_SOYBN Laccase; Found in the gene: LotjaGi1g1v0582000 LjG1.1_chr1 112135679 112140955 +
2 domain predictions
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LotjaGi1g1v0582200.1
n.a. Laccase; TAIR: AT5G60020.1 laccase 17; Swiss-Prot: sp|Q9FJD5|LAC17_ARATH Laccase-17; TrEMBL-Plants: tr|A0A072U047|A0A072U047_MEDTR Laccase; Found in the gene: LotjaGi1g1v0582200 LjG1.1_chr1 112152013 112154864 +
2 domain predictions
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LotjaGi2g1v0388900.1
n.a. Laccase; TAIR: AT5G03260.1 laccase 11; Swiss-Prot: sp|Q8VZA1|LAC11_ARATH Laccase-11; TrEMBL-Plants: tr|I1LHT8|I1LHT8_SOYBN Laccase; Found in the gene: LotjaGi2g1v0388900 LjG1.1_chr2 88493197 88497286 -
2 domain predictions
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LotjaGi2g1v0389000.1
n.a. Laccase; TAIR: AT5G03260.1 laccase 11; Swiss-Prot: sp|Q8VZA1|LAC11_ARATH Laccase-11; TrEMBL-Plants: tr|V7CFI0|V7CFI0_PHAVU Laccase; Found in the gene: LotjaGi2g1v0389000 LjG1.1_chr2 88499388 88502591 -
2 domain predictions
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LotjaGi3g1v0211300.1
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|A0A1J7HEL7|A0A1J7HEL7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0211300 LjG1.1_chr3 31647510 31652487 -
2 domain predictions
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LotjaGi3g1v0398000.1
n.a. Laccase; TAIR: AT2G46570.1 laccase 6; Swiss-Prot: sp|Q9ZPY2|LAC6_ARATH Laccase-6; TrEMBL-Plants: tr|A0A1J7GP42|A0A1J7GP42_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0398000 LjG1.1_chr3 79996681 80002824 +
2 domain predictions
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LotjaGi3g1v0398000.2
n.a. Laccase; TAIR: AT2G46570.1 laccase 6; Swiss-Prot: sp|Q9ZPY2|LAC6_ARATH Laccase-6; TrEMBL-Plants: tr|A0A072TM83|A0A072TM83_MEDTR Laccase; Found in the gene: LotjaGi3g1v0398000 LjG1.1_chr3 79996777 80005094 +
2 domain predictions
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LotjaGi3g1v0489900.1
n.a. Laccase; TAIR: AT2G29130.1 laccase 2; Swiss-Prot: sp|O81081|LAC2_ARATH Laccase-2; TrEMBL-Plants: tr|G7JUW8|G7JUW8_MEDTR Laccase; Found in the gene: LotjaGi3g1v0489900 LjG1.1_chr3 90801789 90805414 -
2 domain predictions
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LotjaGi3g1v0489900.2
n.a. Laccase; TAIR: AT2G29130.1 laccase 2; Swiss-Prot: sp|O81081|LAC2_ARATH Laccase-2; TrEMBL-Plants: tr|I1LQN6|I1LQN6_SOYBN Laccase; Found in the gene: LotjaGi3g1v0489900 LjG1.1_chr3 90802091 90805341 -
2 domain predictions
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LotjaGi4g1v0462700.1
n.a. Laccase; TAIR: AT1G18140.1 laccase 1; Swiss-Prot: sp|Q9LMS3|LAC1_ARATH Laccase-1; TrEMBL-Plants: tr|M5WFA5|M5WFA5_PRUPE Laccase; Found in the gene: LotjaGi4g1v0462700 LjG1.1_chr4 83303884 83307986 -
2 domain predictions
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LotjaGi5g1v0283500.1
n.a. Laccase; TAIR: AT5G09360.1 laccase 14; Swiss-Prot: sp|Q6Z8L2|LAC9_ORYSJ Putative laccase-9; TrEMBL-Plants: tr|A0A1J7FTU7|A0A1J7FTU7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283500 LjG1.1_chr5 59998333 60001164 -
2 domain predictions
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LotjaGi5g1v0283600.1
n.a. Laccase; TAIR: AT5G09360.1 laccase 14; Swiss-Prot: sp|Q9FY79|LAC14_ARATH Laccase-14; TrEMBL-Plants: tr|A0A1J7FTU7|A0A1J7FTU7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0283600 LjG1.1_chr5 60032525 60035721 -
2 domain predictions
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LotjaGi5g1v0283800.1
n.a. Laccase; TAIR: AT5G48100.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|Q84J37|LAC15_ARATH Laccase-15; TrEMBL-Plants: tr|G7J6C9|G7J6C9_MEDTR Laccase; Found in the gene: LotjaGi5g1v0283800 LjG1.1_chr5 60049945 60053273 +
2 domain predictions
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LotjaGi6g1v0080700.1
n.a. Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9SIY8|LAC5_ARATH Laccase-5; TrEMBL-Plants: tr|I1MYY9|I1MYY9_SOYBN Laccase; Found in the gene: LotjaGi6g1v0080700 LjG1.1_chr6 15436690 15441163 -
2 domain predictions
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LotjaGi6g1v0080700.2
n.a. Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9FLB5|LAC12_ARATH Laccase-12; TrEMBL-Plants: tr|A0A0B2PB28|A0A0B2PB28_GLYSO Laccase; Found in the gene: LotjaGi6g1v0080700 LjG1.1_chr6 15436894 15440867 -
2 domain predictions
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LotjaGi6g1v0080700.3
n.a. Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9FLB5|LAC12_ARATH Laccase-12; TrEMBL-Plants: tr|A0A0B2PB28|A0A0B2PB28_GLYSO Laccase; Found in the gene: LotjaGi6g1v0080700 LjG1.1_chr6 15437121 15440767 -
2 domain predictions
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LotjaGi6g1v0080700.4
n.a. Laccase; TAIR: AT2G40370.1 laccase 5; Swiss-Prot: sp|Q9FLB5|LAC12_ARATH Laccase-12; TrEMBL-Plants: tr|I1MYY9|I1MYY9_SOYBN Laccase; Found in the gene: LotjaGi6g1v0080700 LjG1.1_chr6 15437121 15440819 -
2 domain predictions
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LotjaGi6g1v0132300.1
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 LjG1.1_chr6 38137384 38142281 +
2 domain predictions
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LotjaGi6g1v0132300.2
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 LjG1.1_chr6 38137454 38140864 +
2 domain predictions
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LotjaGi6g1v0132300.3
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 LjG1.1_chr6 38138235 38140864 +
2 domain predictions
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LotjaGi6g1v0132300.4
n.a. Laccase; TAIR: AT2G38080.1 Laccase/Diphenol oxidase family protein; Swiss-Prot: sp|O80434|LAC4_ARATH Laccase-4; TrEMBL-Plants: tr|I1N014|I1N014_SOYBN Laccase; Found in the gene: LotjaGi6g1v0132300 LjG1.1_chr6 38138330 38140864 +
2 domain predictions
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