Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR035587
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.034s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0562300.1
n.a. tRNA-dihydrouridine(47) synthase [NAD](P)(+)]; TAIR: AT4G38890.1 FMN-linked oxidoreductases superfamily protein; Swiss-Prot: sp|Q9T0J6|DUS3L_ARATH tRNA-dihydrouridine(47) synthase [NAD](P)(+)]-like; TrEMBL-Plants: tr|K7KHG3|K7KHG3_SOYBN tRNA-dihydrouridine(47) synthase [NAD](P)(+)]; Found in the gene: LotjaGi1g1v0562300 LjG1.1_chr1 109446944 109454895 -
2 domain predictions
 –
LotjaGi1g1v0562300.2
n.a. tRNA-dihydrouridine(47) synthase [NAD](P)(+)]; TAIR: AT4G38890.1 FMN-linked oxidoreductases superfamily protein; Swiss-Prot: sp|Q9T0J6|DUS3L_ARATH tRNA-dihydrouridine(47) synthase [NAD](P)(+)]-like; TrEMBL-Plants: tr|K7KHG3|K7KHG3_SOYBN tRNA-dihydrouridine(47) synthase [NAD](P)(+)]; Found in the gene: LotjaGi1g1v0562300 LjG1.1_chr1 109450108 109454746 -
2 domain predictions
 –
LotjaGi3g1v0121800.1
n.a. tRNA-dihydrouridine synthase; TAIR: AT5G47970.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|Q9KUX9|DUSA_VIBCH tRNA-dihydrouridine(20/20a) synthase; TrEMBL-Plants: tr|K7LI80|K7LI80_SOYBN tRNA-dihydrouridine synthase; Found in the gene: LotjaGi3g1v0121800 LjG1.1_chr3 14917690 14926162 +
2 domain predictions
 –
LotjaGi3g1v0179300.1
n.a. Trna-dihydrouridine(47) synthase [nad](P)(+)]-like protein; TAIR: AT3G49640.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|Q9NX74|DUS2L_HUMAN tRNA-dihydrouridine(20) synthase [NAD](P)+]-like; TrEMBL-Plants: tr|A0A151SZ46|A0A151SZ46_CAJCA tRNA-dihydrouridine synthase; Found in the gene: LotjaGi3g1v0179300 LjG1.1_chr3 24970159 24978402 -
2 domain predictions
 –
LotjaGi3g1v0550700.1
n.a. tRNA-dihydrouridine synthase; TAIR: AT3G63510.1 FMN-linked oxidoreductases superfamily protein; Swiss-Prot: sp|Q8Z1T1|DUSA_SALTI tRNA-dihydrouridine(20/20a) synthase; TrEMBL-Plants: tr|I3SNH2|I3SNH2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0550700 LjG1.1_chr3 96761130 96765165 +
2 domain predictions
 –
LotjaGi4g1v0101600.1
n.a. tRNA-dihydrouridine synthase-like protein; TAIR: AT5G67220.1 FMN-linked oxidoreductases superfamily protein; Swiss-Prot: sp|Q8C2P3|DUS1L_MOUSE tRNA-dihydrouridine(16/17) synthase [NAD](P)(+)]-like; TrEMBL-Plants: tr|I1K265|I1K265_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0101600 LjG1.1_chr4 13917415 13921428 +
2 domain predictions
 –
LotjaGi4g1v0101600.2
n.a. tRNA-dihydrouridine synthase-like protein; TAIR: AT5G67220.1 FMN-linked oxidoreductases superfamily protein; Swiss-Prot: sp|Q8C2P3|DUS1L_MOUSE tRNA-dihydrouridine(16/17) synthase [NAD](P)(+)]-like; TrEMBL-Plants: tr|I1K265|I1K265_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0101600 LjG1.1_chr4 13917662 13921133 +
2 domain predictions
 –