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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR035984
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 4 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.781s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0289200.1
n.a. Acyl-CoA-binding domain protein; TAIR: AT4G27780.1 acyl-CoA binding protein 2; Swiss-Prot: sp|Q9STP8|ACBP2_ARATH Acyl-CoA-binding domain-containing protein 2; TrEMBL-Plants: tr|I1KAV2|I1KAV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0289200 LjG1.1_chr1 70080517 70086426 -
2 domain predictions
1 GO term
LotjaGi5g1v0032200.1
n.a. Acyl-CoA-binding domain protein; TAIR: AT4G24230.6 acyl-CoA-binding domain 3; Swiss-Prot: sp|Q9STX1|ACBP3_ARATH Acyl-CoA-binding domain-containing protein 3; TrEMBL-Plants: tr|A0A072VPF6|A0A072VPF6_MEDTR Acyl-CoA-binding domain protein; Found in the gene: LotjaGi5g1v0032200 LjG1.1_chr5 5320078 5325895 -
2 domain predictions
1 GO term
LotjaGi5g1v0032200.2
n.a. Acyl-CoA-binding domain protein; TAIR: AT4G24230.6 acyl-CoA-binding domain 3; Swiss-Prot: sp|Q9STX1|ACBP3_ARATH Acyl-CoA-binding domain-containing protein 3; TrEMBL-Plants: tr|A0A072VPF6|A0A072VPF6_MEDTR Acyl-CoA-binding domain protein; Found in the gene: LotjaGi5g1v0032200 LjG1.1_chr5 5320078 5325895 -
2 domain predictions
1 GO term
LotjaGi5g1v0222400.1
n.a. Acyl-CoA-binding domain-containing protein 4; TAIR: AT3G05420.2 acyl-CoA binding protein 4; Swiss-Prot: sp|Q9MA55|ACBP4_ARATH Acyl-CoA-binding domain-containing protein 4; TrEMBL-Plants: tr|A0A0B2QFE8|A0A0B2QFE8_GLYSO Acyl-CoA-binding domain-containing protein 4; Found in the gene: LotjaGi5g1v0222400 LjG1.1_chr5 52930381 52939389 +
2 domain predictions
1 GO term