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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0289200 |
| Transcript ID | LotjaGi1g1v0289200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acyl-CoA-binding domain protein; TAIR: AT4G27780.1 acyl-CoA binding protein 2; Swiss-Prot: sp|Q9STP8|ACBP2_ARATH Acyl-CoA-binding domain-containing protein 2; TrEMBL-Plants: tr|I1KAV2|I1KAV2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0289200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:70080517..70086426) extracted from Lotus japonicus Gifu genome v1.2.
AGTCCACATCCACATGGTACCATGTGGTCCATCGCACTTAAAAAAGCAAATTGTTCCTCAACAACATCACACACCGTTGG TATCAATAAAATCTAATAAAATCTCCATGACTCATTCCACGTGTACCGTCAAAACGACGTTGTTGTAAAACCACATGTTC TCCTCGAAGCACCCGATAATTCCCCCAGGCGCCAACAACAGATAGATACCCTCTCACCCTTCTCGCTGCACGGTTTGGTT CCCCCTTCTGAAACTTCCTTCGTAATCTTCCTCAAATCTCGTCAATTTTCCACTCCTCCTTCTTCCTCTCTCTCTCTCTC TCTCTAGAACCAGATGAACATTTTCTAGGGTTTTAGCTTCCACCCTCACAACCGCTTCAAATTCCACGATTTCTCGATTC TCCTTCTAGGGTTTCGTTTCCATGGCTGAATGGCAATCGCTCTTGCAATCCATTATCGTCGGTCTCATTTTCTCTTACCT TCTCGCGAAGCTAATCTCCATCGTGGTTTCATTCAAGGAGGATAATCTCACCATCACACGGGCTGCGGCGGAGCCTGATG ACGCCGCCGCCGCCAAGCAACACGACGACGCCGTTTCAGCTTCCGATGCCGCCGCGGCGCAACGCTCTGAGCTTGAGTCG GTGATGGCTGAGCAGGGTAGCGTGAGGAATGAGAGCCTTGATGGCGGTGACGATGATTACGAGGATGATTGGGAAGGGGT GGAGAGTACGGAATTGGATGAGGCGTTTAGTGCTGCTACGGCGTTTGTTGCTGCTGCCGCCGCTGATCGGCTCTCGCAGA AGGTTTCTAATGATGTGCAGCTGCAGCTTTATGGGTTGTATAAGATTGCCACGGAGGGTCCCTGTAGCACGCAGCAGCCT TCGCCTATCAAACTCACCGCTCGAGCTAAATGGTAATTTTTGCACTGTTCTATAGCCCTTAGCTTTTCCTAAATTTGTTC TATGCGATTCTCTAGACGGCAAATGAAAAAGGAAAGGAACTTTAACTGTACGCAATGTGTTGAAAGGGTAGGGTTAATAA TATATATTGGAATCTTCTTTCTGTTATTCCCATGCATTGAGACAATAATAATGTATGGAATGTTTGACACTTTGACTGCT GATTATTTAGTATTTTGGTCTTTTGGTTGTATTTGTTGTTTGCACTAATAAAGCTTAAGACCGACTCTGTGGCCGTAAAA TGGGCATAGGTTACATTGATATGTTTAATTTGAGAGCATAATGATGTGGGGAATAAATTATGCGCTATTTATGATAATTC TAGGCCGCCGATTTTCCTACCTGATCTAATAAGGACCTTTCTCTATACACGCGAAAAGTGTTATTTGGATATATGTTTGC TTTGATGCTAATGTTTTTGCGCCCCTTTTCTGTAGGCAAGCGTGGCAGAAATTGGGTGCTATGCCTCCTGAAGATGCAAT GCAGAAGTACATTGATATTGTGACTGAACTATATCCTACTTGGCTTGATGGTTCTTCTTTGGTGAGCTAATGAGCTGTTT CTTGTGCTCTGAATGGATGAATCACTAGATGTTTCATTGAAAGGATGCAAATTTATATTTGAAATAGAAGTAGTATGTTT ACTTGCATTCTTTGTGTGTGTGTATCTTTTGTCTTGTCTCTACCTACCTAACTCTTATGATGTCTGTAACAGAGGAGCAA AACTAGTGATGGTGATGGGCATAGTTCAGATGCTAAGGGACCAATGGGGCCAGTGTTCAGCTCTTTCGTTTATGAAGAGG AATGTGGCAGTGACTCGTAAGATTTGTGAAACTCTAAAGTCCAAACTGTATGAGTTTAGTATATATGTTTAGATGGTAAT GCGTTACTAGTTTGTTGTAATAAATTATGTATATGGTATAGTGCTAAATGTAATTGCATTGATGTTCTAGAGTGAAGGGA TGTCTTGAAATGGTAAATTCTAATGGTTTTTGATTCTTTACTCTTTTTTTGGTCTTACACGGTTTATCAAACTATTTGGA GTGAGGCTTATTCTCACATAGGATATAAAGGCTCAGCTCCCCTTCTTCAATTGTATTTATGTTGTAAGGATCCTTTCTGA AGGCTCTGATATGATCCTGGGCTTTTTACACTTATTATCTTGCGTCTTTTTATATTATACCATTGGCACATATAATTTTT GCACCTCTTATGTAAAAACAAGGTATGGCTGCGACAATAGACCAAGTGGTCGGACCCTTCCCCGGCCCCACTCACAGTGG GAGCACCAGGCTGCCCTTTTTAATAGATAGTCTGCAACTTGGTAGGGTTACGTTTGCCACTTTTCCTGAGTCAGCTTTGC TCATAGGTTGTTGCTTCTTTATATTTTCTTGACTAAAAGTGTAAATTTCAGTTGTTTACAACAGCTAAAATTAGTTGTTT CTTTTCCTACGTTTATCTTGTTATGTGCTAGGTCTAGGATATACTCAAAGTGATGGGAGGCCTTGTCAATTTAAATTGTA ACAAATTGAGCAGAGCAAGGAGAAAACCTTCCAGGGATTAAAATAACCTTCTACAACTTTCTAATTTTTATATATTCTTT GGAGTTGTAAAGTATTTTCATTGGATACGTACCCCATGTGTGCCCCTCAGCAAAGTCCCCTTTATCTTAGGATACATTAA AATTTGAATTTATATGGTTTTGATTCTGTTTCTTATAACTAGTCAATGCAATTACCGTATGGAGTTTTCTTGCTTGAAAA TTTAATGATCTATTTGTCATAATTAATTATACCTAATCTTGGAATGGTATGTTCTTTTGTTTTGCAACAATTATTCCTCA CAAAATGGAAGTAGCATAGGGTGAAACTTTGGAATGTTTGAAATCTTTCTGAAAATATATTTTGTTTTTGAGTATGGAAG GAACATGTATTGGACTTACTAAACTGTTATTGTAGTTTCTAAGCATTGCATGATAGGGGATAGGGTAACATAGAAACTTT GGCTTGGTTCTCTATCCTTTGCTTAATAAGGCTAATATAAATCCTTCTCATTATTCTGTTTTACTTGTCATGTCTTATGT CCCCCTTCTTTGGCGTCACCGTTTTGTCTTACACTGATCACCAATTACTAAACTGTTATTGTAGTTTCTAAGCATTGCAT GATAGGGGATAGGATAACATAGAAACTTTGGCTTGGTTCTCTATCCTTTGCTTAATAAGGCTAATATAAATCCTTCTCAT TATTCTGTTTTACTTGTCATGTCTTATGTCTTATGTCTCCCTTCTTTGGCGTCACCGTTTTGTCTTACACTGATCACCAA TTGTCACCTATGCTGTGTGATCCCCCCCCCACCCCCCAAAGCTATTATAACATTTAGTAGGATTTCATAGGCCGATCACA AGGTTGTTTTTATGTTGTAAATTAACAATGTTCTGGATTTTACTGACTTCAATATATCAATTAATGAGAATATCTTATGA ATAAAATTTCAATATAGATAATCAGTGTTTTGTTTTCTCCATTAAGCTATTGACGCTTAGGAGGATTTTATAGGCTGATC ACAAGGTTGTTTTTTGAATATATCACGTACTGATGATATTTTATGAAAAACTTTTGAACAATTAATATCAGAAGTCAGGT AGTGTCTTCATCATAAGGGACTACAATTTCTGGAGTGGAAAAAACATGGATAGACATTGATGCTTCATTATCTTCCTTCA CAGTAAAATGGATGCCATTCATGGATTTGCTAGGGAAGGAGATATGGCTAATCTGCTCAAGTGCATCGAAGATGGTGTTT CAGTGAATGTGAAAGGTGAGTTAGTTATTTTTAGCTATATGCATTTCTAAGTGCATACATTATTCTCAAGCGTGCTGTGC ATGGTCAATATATATATTATATATTTTAATGGATCAAGCTCCTCATCAACAACTTATGTTGACAGAACAATAACTGATTT AACAAGTCAACATCTTTCTGAATTTTAGCAGCATTGCTTTACAAGCCTAATACTAGCATATGCATGCTTCACTGCTTTAG AGTTGGCAGATGCTTTGTTTTTGTTAACAAGCTGAAATAACATGCTTGAAGGCCTATTTGAAGATAGAAAGTTGACTTGA ACTTGCTTTAGGAATTTCATTTCAGATATTAAAACTTAGCTGAAGTGAAGAAATTTATCTTTTCACATGTTGGAACTTTC ATTTTAGCTTTTTGTTTTCACTTGATCTCTCTGGCACCTTTGTTCTTAGGAAGGTATATACCAGTCACTCTGTTGTTTTT TAAAGAAACAGTAGATTTTATGCATAGTAAGGAAGATAACTATAATCAGAGCACAATCTTCCGTAATGTGTTTCCTTCAC AAACTATTGATTTTGTAAGCGGGCTATTTGCCAGTTAAATTTTGGATATGAAAATAAAAGTTGAGTTATCAATGCGGCAT GAAAGAAAAATCTTTTAGAACTCCGTATTAATCCGCTACTCTGAGAGGATTCAATAAGAATAGTCATCACATGATATCGT AATTGTAGAGGATTTTTTTTTTATTACTAAACAACTCACAGTACGATCCTCAGTATTCTTAGTGATTGAAATTGCTGTCT CATGTCATAGTGGGTTCTCAAATTAATGTTTGTATTTAACTAGTATATTATTTTCCTTTTCTTAATCAACATGTATATTT TGAAATGCATGCAGACAGTGAGGGCCGGACACCATTGCACTGGGCTGTGGATCGGGGCCACCTTGATGTCACCGAGCTGC TTCTTGGCAGGAACGCTGATGTAAATGCCAAGGTATTCATCAATGAATGTTTTAATGCAATCATGGGGGGCTATCTGATT TTGTATGCTTTATTGGCTTCGTCATAACTCTTCAGAATGAAAACAGGACGGAACCTTAATTGGAATTTAAAAATTTCTTG CTGCAATGTTCCAAAACGTTGAAGTTTATCTTAGGCTTTTTGAGATGCTTTTGTAGATCTTTTAGTTGTCAATCATAATG TCAAAATTGCTTCTGTTAATGTTGTGTTTTGTTTTTTGAAGGATAATGATGGACAAGCTCCACTGCACTATGCTGTTACA TGTGAGAGAGAAGCCATAGCTGAGTATTTAGTGAAGCATAAAGCAGATACAGATTTAAAGGATAATGATGGGAGTTCCCC GCGTGACATCTGTACGTCAAACTGGCCGTGCATGCAGCAGGTGGGGGAAGTATATTGATTGTTAGCTTTCTTTGTTGCTG CTTTTGGCTAATATAACCCTACCCAAATGCCTTCAGGATATGTACTTGTGGATATAACTCAATTTTTTGCCCTTAGTCTT GTTAATACACCCTTTTCAGTGTAGTTTACGCCTATGCACTGCTTAGGTTATGGTTAATCAAGTATATTTCGTTCTATTAT TTGCTTGACTCTTGATTTTGGCCCTCATTTCTTTATATGGAGAAAGATATAAATGAAACTTGGAGGAACAAGGAAAGGGA GCAATGACATCCTCCCCGCATCCTTTATTTTGTTCTATTGTTGGTGTTATAGAATTCACAAGAGTTTTTTAGGTCCTTAA ATGGTTTCTCATGCTGTCAAAAGTATGTGGAATCTGGTTTTTTCATTTGTTTCTTTTTTTAGCTGATCGGTAGATACATA ATACAGATATTTGAATAGGGAAGAAAAAGTTGGTATTGCTCATCTCCTGCGATTTTGACTAGACAACCAGCTAAAATAGT AAATGATGAAATATTGAATGCTTTTTTTCTTCAATCTAAGATACCAAATGCTAAATGTGCAGAGGCTTATTAAGCATAAC TAAATATATAACTAATTTAGCCCATTCGATGTTTTTCCAGCCATGCTTATATTGTATTTTTGCAAATTTATGTAGTGGTG CCAAAATAGTACTAGAAAAAATAAATTCATTCAATGATGTAAAACCAACCATTACTCTGTTAACCACTAC
CDS sequence (LotjaGi1g1v0289200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAATGGCAATCGCTCTTGCAATCCATTATCGTCGGTCTCATTTTCTCTTACCTTCTCGCGAAGCTAATCTCCAT CGTGGTTTCATTCAAGGAGGATAATCTCACCATCACACGGGCTGCGGCGGAGCCTGATGACGCCGCCGCCGCCAAGCAAC ACGACGACGCCGTTTCAGCTTCCGATGCCGCCGCGGCGCAACGCTCTGAGCTTGAGTCGGTGATGGCTGAGCAGGGTAGC GTGAGGAATGAGAGCCTTGATGGCGGTGACGATGATTACGAGGATGATTGGGAAGGGGTGGAGAGTACGGAATTGGATGA GGCGTTTAGTGCTGCTACGGCGTTTGTTGCTGCTGCCGCCGCTGATCGGCTCTCGCAGAAGGTTTCTAATGATGTGCAGC TGCAGCTTTATGGGTTGTATAAGATTGCCACGGAGGGTCCCTGTAGCACGCAGCAGCCTTCGCCTATCAAACTCACCGCT CGAGCTAAATGGCAAGCGTGGCAGAAATTGGGTGCTATGCCTCCTGAAGATGCAATGCAGAAGTACATTGATATTGTGAC TGAACTATATCCTACTTGGCTTGATGGTTCTTCTTTGAGGAGCAAAACTAGTGATGGTGATGGGCATAGTTCAGATGCTA AGGGACCAATGGGGCCAGTGTTCAGCTCTTTCGTTTATGAAGAGGAATGTGGCAGTGACTCTAAAATGGATGCCATTCAT GGATTTGCTAGGGAAGGAGATATGGCTAATCTGCTCAAGTGCATCGAAGATGGTGTTTCAGTGAATGTGAAAGACAGTGA GGGCCGGACACCATTGCACTGGGCTGTGGATCGGGGCCACCTTGATGTCACCGAGCTGCTTCTTGGCAGGAACGCTGATG TAAATGCCAAGGATAATGATGGACAAGCTCCACTGCACTATGCTGTTACATGTGAGAGAGAAGCCATAGCTGAGTATTTA GTGAAGCATAAAGCAGATACAGATTTAAAGGATAATGATGGGAGTTCCCCGCGTGACATCTGTACGTCAAACTGGCCGTG CATGCAGCAGGTGGGGGAAGTATATTGA
Protein sequence (LotjaGi1g1v0289200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEWQSLLQSIIVGLIFSYLLAKLISIVVSFKEDNLTITRAAAEPDDAAAAKQHDDAVSASDAAAAQRSELESVMAEQGS VRNESLDGGDDDYEDDWEGVESTELDEAFSAATAFVAAAAADRLSQKVSNDVQLQLYGLYKIATEGPCSTQQPSPIKLTA RAKWQAWQKLGAMPPEDAMQKYIDIVTELYPTWLDGSSLRSKTSDGDGHSSDAKGPMGPVFSSFVYEEECGSDSKMDAIH GFAREGDMANLLKCIEDGVSVNVKDSEGRTPLHWAVDRGHLDVTELLLGRNADVNAKDNDGQAPLHYAVTCEREAIAEYL VKHKADTDLKDNDGSSPRDICTSNWPCMQQVGEVY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 350 | 350 | 3.4E-153 | – | |
| PANTHER | 1 | 350 | 350 | 3.4E-153 | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 31 | 26 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 32 | 355 | 324 | - | – | |
| MobiDBLite | 74 | 97 | 24 | - | – | |
| Gene3D | 99 | 211 | 113 | 9.0E-34 | ||
| SUPERFAMILY | 104 | 194 | 91 | 6.02E-27 | ||
| ProSiteProfiles | 105 | 195 | 91 | 41.374 | ||
| Pfam | 106 | 190 | 85 | 3.0E-27 | ||
| PRINTS | 128 | 146 | 19 | 3.1E-9 | ||
| PRINTS | 151 | 166 | 16 | 3.1E-9 | ||
| PRINTS | 172 | 189 | 18 | 3.1E-9 | ||
| Gene3D | 222 | 345 | 124 | 1.3E-35 | ||
| SUPERFAMILY | 233 | 344 | 112 | 1.71E-30 | ||
| ProSiteProfiles | 234 | 337 | 104 | 31.511 | ||
| SMART | 234 | 263 | 30 | 4000.0 | ||
| Pfam | 240 | 331 | 92 | 1.9E-14 | ||
| ProSiteProfiles | 267 | 299 | 33 | 15.975 | ||
| SMART | 267 | 296 | 30 | 8.7E-8 | ||
| PRINTS | 268 | 283 | 16 | 5.6E-6 | ||
| SMART | 300 | 329 | 30 | 0.0098 | ||
| ProSiteProfiles | 300 | 332 | 33 | 11.621 | ||
| PRINTS | 316 | 330 | 15 | 5.6E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Fatty-acyl-CoA binding | Interacting selectively and non-covalently with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0289200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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