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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036616
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.300s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0711100.1
n.a. Poly [ADP]-ribose] polymerase; TAIR: AT2G31320.1 poly(ADP-ribose) polymerase 2; Swiss-Prot: sp|Q9ZP54|PARP1_ARATH Poly [ADP]-ribose] polymerase 1; TrEMBL-Plants: tr|A0A072U2F3|A0A072U2F3_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi1g1v0711100 LjG1.1_chr1 127942347 127951960 -
3 domain predictions
2 GO terms
LotjaGi1g1v0711100.2
n.a. Poly [ADP]-ribose] polymerase; TAIR: AT2G31320.1 poly(ADP-ribose) polymerase 2; Swiss-Prot: sp|Q9ZP54|PARP1_ARATH Poly [ADP]-ribose] polymerase 1; TrEMBL-Plants: tr|A0A072U2F3|A0A072U2F3_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi1g1v0711100 LjG1.1_chr1 127943481 127951891 -
3 domain predictions
2 GO terms
LotjaGi1g1v0711100.3
n.a. Poly [ADP]-ribose] polymerase; TAIR: AT2G31320.1 poly(ADP-ribose) polymerase 2; Swiss-Prot: sp|Q9ZP54|PARP1_ARATH Poly [ADP]-ribose] polymerase 1; TrEMBL-Plants: tr|A0A072U2F3|A0A072U2F3_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi1g1v0711100 LjG1.1_chr1 127943481 127952773 -
3 domain predictions
2 GO terms
LotjaGi2g1v0337700.1
n.a. Poly [ADP]-ribose] polymerase; TAIR: AT2G31320.1 poly(ADP-ribose) polymerase 2; Swiss-Prot: sp|Q9ZP54|PARP1_ARATH Poly [ADP]-ribose] polymerase 1; TrEMBL-Plants: tr|A0A072U2F3|A0A072U2F3_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi2g1v0337700 LjG1.1_chr2 81476265 81488352 +
3 domain predictions
2 GO terms
LotjaGi2g1v0337700.2
n.a. Poly [ADP]-ribose] polymerase; TAIR: AT2G31320.1 poly(ADP-ribose) polymerase 2; Swiss-Prot: sp|Q9ZP54|PARP1_ARATH Poly [ADP]-ribose] polymerase 1; TrEMBL-Plants: tr|A0A072U2F3|A0A072U2F3_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi2g1v0337700 LjG1.1_chr2 81476353 81488341 +
3 domain predictions
2 GO terms
LotjaGi3g1v0478100.1
n.a. Poly [ADP]-ribose] polymerase; TAIR: AT5G22470.1 poly ADP-ribose polymerase 3; Swiss-Prot: sp|Q9SWB4|PARP3_SOYBN Poly [ADP]-ribose] polymerase 3; TrEMBL-Plants: tr|G7JIG7|G7JIG7_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi3g1v0478100 LjG1.1_chr3 89457033 89464168 +
3 domain predictions
2 GO terms
LotjaGi3g1v0478100.2
n.a. Poly [ADP]-ribose] polymerase; TAIR: AT5G22470.1 poly ADP-ribose polymerase 3; Swiss-Prot: sp|Q9SWB4|PARP3_SOYBN Poly [ADP]-ribose] polymerase 3; TrEMBL-Plants: tr|G7JIG7|G7JIG7_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi3g1v0478100 LjG1.1_chr3 89457110 89461273 +
3 domain predictions
2 GO terms
LotjaGi3g1v0478100.3
n.a. Poly [ADP]-ribose] polymerase; TAIR: AT5G22470.1 poly ADP-ribose polymerase 3; Swiss-Prot: sp|Q1SGF1|PARP3_MEDTR Putative poly [ADP]-ribose] polymerase 3; TrEMBL-Plants: tr|G7JIG7|G7JIG7_MEDTR Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi3g1v0478100 LjG1.1_chr3 89459119 89461273 +
3 domain predictions
2 GO terms
LotjaGi5g1v0249900.1
n.a. Poly [ADP]-ribose] polymerase; TAIR: AT4G02390.2 poly(ADP-ribose) polymerase; Swiss-Prot: sp|O50017|PARP2_MAIZE Poly [ADP]-ribose] polymerase 2; TrEMBL-Plants: tr|A0A151U4Q3|A0A151U4Q3_CAJCA Poly [ADP]-ribose] polymerase; Found in the gene: LotjaGi5g1v0249900 LjG1.1_chr5 55839892 55848465 +
3 domain predictions
2 GO terms